RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 OR2W6PQ8NHA6 318 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 KRT35Q92764 455 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 KCNJ9Q92806 393 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 UBE2FQ969M7 185 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 TMEM186Q96B77 213 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 OMA1Q96E52 524 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 DUX5Q96PT3 197 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 TCF12Q99081 682 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 NXF5Q9H1B4 397 aaKnown RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 PRDM7Q9NQW5 492 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 ACSS1Q9NUB1 689 aaPredicted RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 MRPS18CQ9Y3D5 142 aaKnown RBP8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GRIP1Q9Y3R0 1128 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 EXPH5Q8NEV8 1989 aa8.28□□□□□ -1.08
NEDD1-211ENST00000557454 GOLGA6L10A0A0M3HER8 536 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 ERI2A8K979 691 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 B4DSR2 109 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 M0QZ24 198 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 SNUPNO95149 360 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 STAMBPO95630 424 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 BCL10O95999 233 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 TUBBP07437 444 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 HIST1H2AGP0C0S8 130 aaPredicted RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 DHRS4L1P0CG22 281 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 HIST1H2ADP20671 130 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 OGNP20774 298 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 MDKP21741 143 aaPredicted RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 PLCXD2Q0VAA5 305 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 SLBPQ14493 270 aaKnown RBP eCLIP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 TMIGD1Q6UXZ0 262 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 PALM2Q8IXS6 379 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 C7orf57Q8NEG2 295 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 TTLQ8NG68 377 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 OR4K17Q8NGC6 315 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 MFSD3Q96ES6 412 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 DTNBP1Q96EV8 351 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 HIST1H2AHQ96KK5 128 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 CDK15Q96Q40 435 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 F2RL3Q96RI0 385 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 HIST1H2AJQ99878 128 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 H2AFJQ9BTM1 129 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 ANP32EQ9BTT0 268 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 SAP130Q9H0E3 1048 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 RPF2Q9H7B2 306 aaKnown RBP8.27□□□□□ -1.09
NEDD1-211ENST00000557454 ETNK1Q9HBU6 452 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 ASIC3Q9UHC3 531 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 MGAT4BQ9UQ53 548 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 ARFGEF3Q5TH69 2177 aa8.27□□□□□ -1.09
NEDD1-211ENST00000557454 DNAH3Q8TD57 4116 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 OR2M5A3KFT3 312 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 J3QL48 77 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 CLEC3AO75596 197 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ZNF189O75820 626 aaPredicted RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 LYZL6O75951 148 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 SLU7O95391 586 aaKnown RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 AVPP01185 164 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 NAGAP17050 411 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 HK1P19367 917 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 GPX3P22352 226 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 GRK2P25098 689 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ATP5A1P25705 553 aaKnown RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 GIFP27352 417 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 BUD31P41223 144 aaPredicted RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 DSCR4P56555 118 aaPredicted RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ITGADQ13349 1161 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ACAP2Q15057 778 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 SLC18A3Q16572 532 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 TMEM108Q6UXF1 575 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 UBE3DQ7Z6J8 389 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 EXOC3L1Q86VI1 746 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 THOC6Q86W42 341 aaKnown RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ZNF615Q8N8J6 731 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ACOT4Q8N9L9 421 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 C17orf47Q8NEP4 570 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 C22orf15Q8WYQ4 148 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 FBXL8Q96CD0 374 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 MUCL1Q96DR8 90 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 FBXO17Q96EF6 278 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 KCNC2Q96PR1 638 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 LRRC37BQ96QE4 947 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 VRK1Q99986 396 aaPredicted RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 PELOQ9BRX2 385 aaKnown RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 INPP5KQ9BT40 448 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 OSBPL8Q9BZF1 889 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 NUP62CLQ9H1M0 184 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 CCDC68Q9H2F9 335 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 RASSF4Q9H2L5 321 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 FBXO6Q9NRD1 293 aaPredicted RBP8.26□□□□□ -1.09
NEDD1-211ENST00000557454 ATP23Q9Y6H3 246 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 NOTCH3Q9UM47 2321 aa8.26□□□□□ -1.09
NEDD1-211ENST00000557454 WASHC1A8K0Z3 465 aa8.25□□□□□ -1.09
NEDD1-211ENST00000557454 E7EVH7 732 aa8.25□□□□□ -1.09
NEDD1-211ENST00000557454 EIF1AYO14602 144 aaKnown RBP8.25□□□□□ -1.09
NEDD1-211ENST00000557454 SCAMP2O15127 329 aaKnown RBP8.25□□□□□ -1.09
NEDD1-211ENST00000557454 GUCA1CO95843 209 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms