RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF100Q8IYN0 542 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MGLLQ99685 303 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF251Q9BRH9 671 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PITHD1Q9GZP4 211 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR51J1Q9H342 316 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SCN3AQ9NY46 2000 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF780AO75290 641 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GLB1P16278 677 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TNK1Q13470 666 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GPC2Q8N158 579 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GAR1Q9NY12 217 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PLEK2Q9NYT0 353 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CACNG2Q9Y698 323 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SOX1O00570 391 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CORO1AP31146 461 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GABRA2P47869 451 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TMIGD1Q6UXZ0 262 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TMEM150AQ86TG1 271 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PIGMQ9H3S5 423 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 FAM118AQ9NWS6 357 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CPQQ9Y646 472 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 COL6A6A6NMZ7 2263 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PPP5D1E7EU14 171 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TNFP01375 233 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PIRTP0C851 137 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GSK3BP49841 420 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 HNF4GQ14541 408 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 FBXO22Q8NEZ5 403 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF317Q96PQ6 595 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 GATA5Q9BWX5 397 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 KIAA0513O60268 411 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CYTIPO60759 359 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MBP02144 154 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CD63P08962 238 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CNR1P21554 472 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 HTR3AP46098 478 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PRKCZQ05513 592 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TRNP1Q6NT89 227 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CRTC1Q6UUV9 634 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TICAM1Q8IUC6 712 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ABHD11Q8NFV4 315 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PPTC7Q8NI37 304 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 COQ4Q9Y3A0 265 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 A6NIZ1 184 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PRSS44E7EML9 344 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MSTNO14793 375 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 RAP1BP61224 184 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 RAP1AP62834 184 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF679Q8IYX0 411 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR5T1Q8NG75 326 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 WASH6PQ9NQA3 447 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OSER1Q9NX31 292 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SMIM35A0A1B0GVV1 85 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ATPAF1Q5TC12 328 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TMEM220Q6QAJ8 160 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR4N5Q8IXE1 308 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF382Q96SR6 550 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 AMBNQ9NP70 447 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 NPFFR2Q9Y5X5 522 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MYO3AQ8NEV4 1616 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 INHAP05111 366 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 LGALS2P05162 132 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CRMP1Q14194 572 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 TRMT2BQ96GJ1 504 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 FAM46AQ96IP4 442 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 NMNAT2Q9BZQ4 307 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PGCP20142 388 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 RPS5P46782 204 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF33BQ06732 778 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MAMDC2Q7Z304 686 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 EID2Q8N6I1 236 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR5AK2Q8NH90 309 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 LRIG1Q96JA1 1093 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ATRNO75882 1429 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MEP1BQ16820 701 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CELF3Q5SZQ8 465 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 FAM110BQ8TC76 370 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 DNAJC27Q9NZQ0 273 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 VAPAQ9P0L0 249 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 STXBP5LQ9Y2K9 1186 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 HEATR5BQ9P2D3 2071 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 MAFO75444 373 aaPredicted RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 XYLT1Q86Y38 959 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ATG2BQ96BY7 2078 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 A8MUI8 341 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ELK1P19419 428 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 UBE2NP61088 152 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CERS5Q8N5B7 392 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms