RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SEMA3DO95025 777 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 CBX7O95931 251 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 CGAP01215 116 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 ATP1B1P05026 303 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 LTA4HP09960 611 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 DRD5P21918 477 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 DPP4P27487 766 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 FEN1P39748 380 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 TPD52P55327 224 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 CLDN15P56746 228 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 B3GALT5-AS1P59052 145 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 GPX6P59796 221 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 MAP4K2Q12851 820 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 SLMAPQ14BN4 828 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 PFKFB4Q16877 469 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 CCNYL2Q5T2Q4 361 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 HEPHL1Q6MZM0 1159 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 FAM180BQ6P0A1 224 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF704Q6ZNC4 412 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 TBC1D1Q86TI0 1168 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC35F6Q8N357 371 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF610Q8N9Z0 462 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 OR52R1Q8NGF1 315 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 PYROXD1Q8WU10 500 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 TMCO6Q96DC7 493 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 COL21A1Q96P44 957 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 ADOQ96SZ5 270 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 PINK1Q9BXM7 581 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 MRPL1Q9BYD6 325 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 IPPKQ9H8X2 491 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 PSD3Q9NYI0 1048 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF639Q9UID6 485 aa8.14□□□□□ -1.11
HNRNPC-227ENST00000556897 FRG2CA6NGY1 282 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 FAM159BA6NKW6 160 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SYCE1LA8MT33 242 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 TO15178 435 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 KLF4O43474 513 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 NME6O75414 186 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 ERAL1O75616 437 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SOX30O94993 753 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PLAUP00749 431 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 THBDP07204 575 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CD8BP10966 210 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GFAPP14136 432 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PCSK2P16519 638 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CSNK2A2P19784 350 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 TBXA2RP21731 343 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GRK2P25098 689 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 ARL1P40616 181 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PPICP45877 212 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 EMDP50402 254 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SUCLG1P53597 346 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 MAPK12P53778 367 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CORO7P57737 925 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 DUSP2Q05923 314 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GTF2H2Q13888 395 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 VEZF1Q14119 521 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 LTB4RQ15722 352 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 BCL2A1Q16548 175 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CLEC12BQ2HXU8 276 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 EXOC3L2Q2M3D2 409 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 BEX5Q5H9J7 111 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 C10orf62Q5T681 223 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC48A1Q6P1K1 146 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GTF2H2CQ6P1K8 395 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SH2D5Q6ZV89 423 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GOLGA7Q7Z5G4 137 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CTAGE3PQ8IX95 158 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 L3MBTL4Q8NA19 623 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 FNDC9Q8TBE3 224 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 KCTD4Q8WVF5 259 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CAVIN3Q969G5 261 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 NXNL1Q96CM4 212 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 DTNBP1Q96EV8 351 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 KCNK17Q96T54 332 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SERPINI1Q99574 410 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 ALG2Q9H553 416 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 RNF122Q9H9V4 155 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PRODH2Q9UF12 536 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 CES1P1Q9UKY3 287 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PROCRQ9UNN8 238 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 LAMP3Q9UQV4 416 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 GPR55Q9Y2T6 319 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 SNX24Q9Y343 169 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 MRPS18CQ9Y3D5 142 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PCDHA9Q9Y5H5 950 aa8.13□□□□□ -1.11
HNRNPC-227ENST00000556897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.112e-8■■■■■ 30.8
HNRNPC-227ENST00000556897 A0A087X1B8 175 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 C1orf226A1L170 272 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 HS3ST1O14792 307 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SEC14L5O43304 696 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SIX3O95343 332 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CLDN9O95484 217 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 IFNA2P01563 188 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CT45A8P0DMV1 189 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CT45A9P0DMV2 189 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms