RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 GXYLT2A0PJZ3 443 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 FAM234BA2RU67 622 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 NR5A2O00482 541 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 TO15178 435 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 PPM1BO75688 479 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 RASAL1O95294 804 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 HMGN2P05204 90 aaKnown RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 IL6P05231 212 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 LSP1P33241 339 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 GABRA3P34903 492 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 CDKN2CP42773 168 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 TMED10P49755 219 aaKnown RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 MEOX1P50221 254 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 ATP4BP51164 291 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 RPS26P62854 115 aaKnown RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 GNGT1P63211 74 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 PRAMEF20Q5VT98 475 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 RPUSD3Q6P087 351 aaKnown RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 FUNDC1Q8IVP5 155 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 SULF2Q8IWU5 870 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 CDRT4Q8N9R6 151 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 GOLM1Q8NBJ4 401 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 CPT1CQ8TCG5 803 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 PIK3R3Q92569 461 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 SGCZQ96LD1 299 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 CCDC115Q96NT0 180 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 FAM107BQ9H098 131 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 ZNF385DQ9H6B1 395 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 SH2D2AQ9NP31 389 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 DEPPQ9NTK1 212 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 ASF1BQ9NVP2 202 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 BTNL2Q9UIR0 455 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 TRIM33Q9UPN9 1127 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 KLF13Q9Y2Y9 288 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-225ENST00000556798 PCDHGB6Q9Y5F9 930 aa16.09■□□□□ 0.17
SHMT2-225ENST00000556798 NBASA2RRP1 2371 aa16.08■□□□□ 0.17
SHMT2-225ENST00000556798 PINLYPA6NC86 204 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 CAPN14A8MX76 684 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PEX1O43933 1283 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 UGT2B11O75310 529 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 REM1O75628 298 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 GSNP06396 782 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 FREM3P0C091 2139 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PIGAP37287 484 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 RFC3P40938 356 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 RFX3P48380 749 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 DNASE1L1P49184 302 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PRIM2P49643 509 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 CASP9P55211 416 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 INAQ16352 499 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 DUSP5Q16690 384 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 AGKQ53H12 422 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 SLC22A10Q63ZE4 541 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 BICRALQ6AI39 1079 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 FAM180AQ6UWF9 173 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 DND1Q8IYX4 353 aaKnown RBP16.08■□□□□ 0.16
SHMT2-225ENST00000556798 SLC16A11Q8NCK7 471 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 GPR151Q8TDV0 419 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 GRHL3Q8TE85 626 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PAQR8Q8TEZ7 354 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 C10orf82Q8WW14 230 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 HOXB13Q92826 284 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-225ENST00000556798 MOAP1Q96BY2 351 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 EFHD2Q96C19 240 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PANX1Q96RD7 426 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 Q9N2J8 555 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 SERHLQ9NQF3 203 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 SACM1LQ9NTJ5 587 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 CBLCQ9ULV8 474 aa16.08■□□□□ 0.16
SHMT2-225ENST00000556798 CHCHD2Q9Y6H1 151 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-225ENST00000556798 PYCARD-AS1I3L0S3 204 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 TP53I11O14683 189 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 NKX2-2O95096 273 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 C1QCP02747 245 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 P04436 131 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 ALOX5P09917 674 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 UQCRC2P22695 453 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 IL12BP29460 328 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 KRT20P35900 424 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 MAP3K8P41279 467 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 KCNK10P57789 538 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 RCAN2Q14206 197 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 EXOSC6Q5RKV6 272 aaKnown RBP16.07■□□□□ 0.16
SHMT2-225ENST00000556798 SLC2A7Q6PXP3 512 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 GK5Q6ZS86 529 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 C6orf120Q7Z4R8 191 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 GALNT10Q86SR1 603 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 ZNF605Q86T29 641 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 BCORP1Q8N888 145 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 FAM98AQ8NCA5 519 aaKnown RBP16.07■□□□□ 0.16
SHMT2-225ENST00000556798 GOT1L1Q8NHS2 421 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-225ENST00000556798 SPPL2AQ8TCT8 520 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 DIO2Q92813 273 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 HGDQ93099 445 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 RMND5BQ96G75 393 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-225ENST00000556798 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms