RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CCL21O00585 134 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 PRRG2O14669 202 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 AKAP10O43572 662 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ZG16O60844 167 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 IGHG3P01860 377 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ABCB1P08183 1280 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CT45A8P0DMV1 189 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CT45A9P0DMV2 189 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 PTGS2P35354 604 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 FRKP42685 505 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 MAGEA5P43359 124 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 SLC1A6P48664 564 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CORO7P57737 925 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 MAGOHP61326 146 aaKnown RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 STX3Q13277 289 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 PDCD2Q16342 344 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ZNF385BQ569K4 471 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CT45A2Q5DJT8 189 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ANKRD26P1Q6NSI1 321 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 R3HCC1LQ7Z5L2 792 aaKnown RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 LIX1Q8N485 282 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 FNDC5Q8NAU1 212 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 HGDQ93099 445 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 TUBGCP3Q96CW5 907 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ELP4Q96EB1 424 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ZBED6CLQ96FA7 236 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CCDC120Q96HB5 630 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 RILPQ96NA2 401 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 SORT1Q99523 831 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 PAIP2Q9BPZ3 127 aaKnown RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 C1orf50Q9BV19 199 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ANGPTL4Q9BY76 406 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 C20orf27Q9GZN8 174 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 DEFB127Q9H1M4 99 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 ACSS1Q9NUB1 689 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 B4GALT7Q9UBV7 327 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 PLEKHB1Q9UF11 243 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 BAIAP2L1Q9UHR4 511 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 C19orf53Q9UNZ5 99 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-205ENST00000556310 CENPEQ02224 2701 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 FREM3P0C091 2139 aa10.58□□□□□ -0.72
SLIRP-205ENST00000556310 A1L4Q6 167 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 OR6C70A6NIJ9 312 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 UPK1AO00322 258 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 SCAMP2O15127 329 aaKnown RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 ZNHIT1O43257 154 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 UGT2B11O75310 529 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 SNX4O95219 450 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 TPOP07202 933 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 PRPS2P11908 318 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 CASP3P42574 277 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 RPL14P50914 215 aaKnown RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 WDR4P57081 412 aaKnown RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 BST1Q10588 318 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 HSPB3Q12988 150 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 MAD2L1Q13257 205 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 PTGR1Q14914 329 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 TMEM198Q66K66 360 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 BICRALQ6AI39 1079 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 RPTNQ6XPR3 784 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 TRILQ7L0X0 811 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 MAMDC2Q7Z304 686 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 ZNF551Q7Z340 670 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 NUP54Q7Z3B4 507 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 CD163Q86VB7 1156 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 EID3Q8N140 333 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 FAM57AQ8TBR7 257 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 TMBIM1Q969X1 311 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 CIDECQ96AQ7 238 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 NTNG2Q96CW9 530 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 SLC35A4Q96G79 324 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 TMEM41AQ96HV5 264 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 COL21A1Q96P44 957 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 METTL7AQ9H8H3 244 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 ASIC5Q9NY37 505 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 NKIRAS1Q9NYS0 192 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 SH3BP4Q9P0V3 963 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 ATP6V1HQ9UI12 483 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 LIPGQ9Y5X9 500 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 MAST4O15021 2626 aa10.57□□□□□ -0.72
SLIRP-205ENST00000556310 PHF3Q92576 2039 aaKnown RBP10.57□□□□□ -0.72
SLIRP-205ENST00000556310 NBPF19A0A087WUL8 3843 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 CACNA1CQ13936 2221 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 A0A1B0GVC2 190 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 OR14I1A6ND48 311 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 PRAMEF25A6NGN4 478 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 TTC36A6NLP5 189 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 E9PLN8 166 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 AQP7O14520 342 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 SUSD5O60279 629 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 TSPAN2O60636 221 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 HCN1O60741 890 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 NME6O75414 186 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-205ENST00000556310 PDE9AO76083 593 aa10.56□□□□□ -0.72
SLIRP-205ENST00000556310 CLDN1O95832 211 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms