RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CCDC68Q9H2F9 335 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ANKZF1Q9H8Y5 726 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 PELI2Q9HAT8 420 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 EIF2B3Q9NR50 452 aaKnown RBP6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SNX12Q9UMY4 172 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 TENM1Q9UKZ4 2725 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 IGHV4-30-2A0A087WSY4 118 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 IQANK1A0A1B0GTG1 560 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CTAGE9A4FU28 777 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CAPN14A8MX76 684 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 AP3B1O00203 1094 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PLOD2O00469 737 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 HCRTR2O43614 444 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 OR10H2O60403 315 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LMX1BO60663 402 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CGAP01215 116 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 F7P08709 466 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 DANCRP0C864 163 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PPP3CBP16298 524 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 MGAT1P26572 445 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PTPN6P29350 595 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 HNRNPH1P31943 449 aaKnown RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CDKN1AP38936 164 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CASP3P42574 277 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 STT3AP46977 705 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 STARP49675 285 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PLA2G16P53816 162 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 FBXW4P57775 412 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 ID2Q02363 134 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LOXL1Q08397 574 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 C2orf54Q08AI8 447 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 BIKQ13323 160 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 RPS6KA2Q15349 733 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PDLIM3Q53GG5 364 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 OR2A2Q6IF42 318 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LRRC8EQ6NSJ5 796 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TTC27Q6P3X3 843 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 CASC4Q6P4E1 433 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 SBSNQ6UWP8 590 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 P4HA3Q7Z4N8 544 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PRUNE1Q86TP1 453 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 MEX3DQ86XN8 651 aaKnown RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TAGAPQ8N103 731 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF610Q8N9Z0 462 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TTLQ8NG68 377 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 OR10H5Q8NGA6 315 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 OR1J4Q8NGS1 313 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LILRB1Q8NHL6 650 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 EEF1AKMT1Q8WVE0 214 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 RBM18Q96H35 190 aaKnown RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TSNARE1Q96NA8 513 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 KLHL4Q9C0H6 718 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LYRM4Q9HD34 91 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF446Q9NWS9 450 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 TEX10Q9NXF1 929 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 ARL15Q9NXU5 204 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 PTBP2Q9UKA9 531 aaKnown RBP6.16□□□□□ -1.42
ATXN3-236ENST00000556220 LIPT1Q9Y234 373 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 DLGAP4Q9Y2H0 992 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 MAD1L1Q9Y6D9 718 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 COMMD10Q9Y6G5 202 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 DYSFO75923 2080 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 MALRD1Q5VYJ5 2156 aa6.16□□□□□ -1.42
ATXN3-236ENST00000556220 FAM234BA2RU67 622 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 UBFD1O14562 309 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ZSCAN12O43309 604 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 EMC8O43402 210 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 NDUFS7O75251 213 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 CDH16O75309 829 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 URI1O94763 535 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TPM1P09493 284 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ETS1P14921 441 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 CERS1P27544 350 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ECHS1P30084 290 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 RGS4P49798 205 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 LHX2P50458 406 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 GFRA1P56159 465 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 AP1S2P56377 157 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 RPP38P78345 283 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 IGLV3-21P80748 117 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TIAL1Q01085 375 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 GPS1Q13098 491 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 SQLEQ14534 574 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 EBPQ15125 230 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 OASLQ15646 514 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ERCC6LQ2NKX8 1250 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ADPRMQ3LIE5 342 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF470Q6ECI4 717 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 ABHD17CQ6PCB6 329 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TMEM64Q6YI46 380 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 DGAT2L6Q6ZPD8 337 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 SLC29A4Q7RTT9 530 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 TMPRSS11BQ86T26 416 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 THOC6Q86W42 341 aaKnown RBP6.15□□□□□ -1.42
ATXN3-236ENST00000556220 DENND6AQ8IWF6 608 aa6.15□□□□□ -1.42
ATXN3-236ENST00000556220 OR4N5Q8IXE1 308 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms