RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ASB18Q6ZVZ8 466 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ARPINQ7Z6K5 226 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 DHDDSQ86SQ9 333 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 SLC34A3Q8N130 599 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 BEST3Q8N1M1 668 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ZNF441Q8N8Z8 693 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 OR5AK3PQ8NH89 298 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 MIPOL1Q8TD10 442 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TTC9Q92623 222 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 HAS2Q92819 552 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ROPN1LQ96C74 230 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 SPACA9Q96E40 222 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 CRELD1Q96HD1 420 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 C5orf34Q96MH7 638 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 RASL10BQ96S79 203 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 UBL7Q96S82 380 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 CCDC106Q9BWC9 280 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 BTBD2Q9BX70 525 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PAIP1Q9H074 479 aaKnown RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.06□□□□□ -1.28
TDP1-214ENST00000556063 NXF5Q9H1B4 397 aaKnown RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 PIGUQ9H490 435 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ANKRA2Q9H9E1 313 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TPT1P8Q9HAU6 139 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 HHATLQ9HCP6 504 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TIMMDC1Q9NPL8 285 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 SLC52A3Q9NQ40 469 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 LRFN1Q9P244 771 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 LHX6Q9UPM6 363 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 LIPT1Q9Y234 373 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 AP3M1Q9Y2T2 418 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PCDHB14Q9Y5E9 798 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TLN1Q9Y490 2541 aaKnown RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 CPAMD8Q8IZJ3 1885 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PCSK5Q92824 1860 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 COL6A6A6NMZ7 2263 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 NINQ8N4C6 2090 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TRAV17A0A0B4J275 112 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 ASPDHA6ND91 283 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TMEM200CA6NKL6 621 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 AIM2O14862 343 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 PPM1BO75688 479 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 WDPCPO95876 746 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CT45A8P0DMV1 189 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CT45A9P0DMV2 189 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 ATP6V1C1P21283 382 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 ABCD3P28288 659 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 LCN1P31025 176 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 SOX3P41225 446 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CDKN2CP42773 168 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CRATP43155 626 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CLK3P49761 638 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 PNLIPRP2P54317 469 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CORO7P57737 925 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 POU6F2P78424 691 aaPredicted RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 HPCAP84074 193 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 PSG6Q00889 435 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 GAB1Q13480 694 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 KRT72Q14CN4 511 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 NNATQ16517 81 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 LINC00303Q3SY05 128 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CT45A2Q5DJT8 189 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 PAGE3Q5JUK9 113 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TBCELQ5QJ74 424 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 REP15Q6BDI9 236 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 IL20RBQ6UXL0 311 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 RTL4Q6ZR62 310 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 NUP54Q7Z3B4 507 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 C16orf62Q7Z3J2 963 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 RNF130Q86XS8 419 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TREML1Q86YW5 311 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 CYP4Z2PQ8N1L4 340 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 POU5F2Q8N7G0 328 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TMEM178AQ8NBL3 297 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 SLC16A11Q8NCK7 471 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 LSM14AQ8ND56 463 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 SIMC1Q8NDZ2 872 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 FAM13CQ8NE31 585 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 OR52N2Q8NGI0 321 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 ZFP90Q8TF47 636 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 XAGE5Q8WWM1 108 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 HOXB13Q92826 284 aaPredicted RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 LRRC58Q96CX6 371 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 RCN3Q96D15 328 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 TMCO6Q96DC7 493 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 OMA1Q96E52 524 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 GIMAP5Q96F15 307 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 C16orf58Q96GQ5 468 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 COL21A1Q96P44 957 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 OR7D2Q96RA2 312 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 SECISBP2Q96T21 854 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 CGREF1Q99674 301 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 YIPF4Q9BSR8 244 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 G6PC3Q9BUM1 346 aa7.05□□□□□ -1.28
TDP1-214ENST00000556063 THUMPD3Q9BV44 507 aaKnown RBP7.05□□□□□ -1.28
TDP1-214ENST00000556063 TRIM4Q9C037 500 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms