RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PLCXD2Q0VAA5 305 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 MGAT2Q10469 447 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 ATP1A4Q13733 1029 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 VEZF1Q14119 521 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 EBPQ15125 230 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 VMACQ2NL98 169 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CYP27C1Q4G0S4 372 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CRTC2Q53ET0 693 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PIGGQ5H8A4 983 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 DCST2Q5T1A1 773 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PRAMEF8Q5VWM4 474 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PRAMEF7Q5VXH5 474 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 REEP3Q6NUK4 255 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 KIRREL2Q6UWL6 708 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 DGAT2L6Q6ZPD8 337 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 NET1Q7Z628 596 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PATL1Q86TB9 770 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 DHFR2Q86XF0 187 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 DND1Q8IYX4 353 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 HORMAD2Q8N7B1 307 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RNF148Q8N7C7 305 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF615Q8N8J6 731 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 OR5D16Q8NGK9 328 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF721Q8TF20 911 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 LZICQ8WZA0 190 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 FIG4Q92562 907 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CDS1Q92903 461 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 TP53INP1Q96A56 240 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 HSPBAP1Q96EW2 488 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RMND5BQ96G75 393 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RSRC1Q96IZ7 334 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 LCORQ96JN0 433 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 VSTM2LQ96N03 204 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 BTBD9Q96Q07 612 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CCNL2Q96S94 520 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 ITPAQ9BY32 194 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CADM1Q9BY67 442 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 TRIM8Q9BZR9 551 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 SEMA4CQ9C0C4 833 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PIF1Q9H611 641 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 EPS8L2Q9H6S3 715 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 POLE3Q9NRF9 147 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 ADPRHL2Q9NX46 363 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CMTM6Q9NX76 183 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 DKK4Q9UBT3 224 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RPS6KA6Q9UK32 745 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PPIEQ9UNP9 301 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 POLHQ9Y253 713 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 EPG5Q9HCE0 2579 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 PRORSD1PA6NEY8 169 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 A8MVJ9 347 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 HMGN4O00479 90 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 ABCB7O75027 752 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 STX11O75558 287 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 SERPINA7P05543 415 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 OR12D1P0DN82 309 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 ARAFP10398 606 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 DRD5P21918 477 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 ITGA3P26006 1051 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TRHRP34981 398 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 CLK3P49761 638 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 EMDP50402 254 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 GPR143P51810 404 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 CASP9P55211 416 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 POLE2P56282 527 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 FOXL2P58012 376 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 CDC20Q12834 499 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TRAP1Q12931 704 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 SELPLGQ14242 412 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TGIF1Q15583 401 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 NNATQ16517 81 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 DUSP5Q16690 384 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 LRRC23Q53EV4 343 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 EIPR1Q53HC9 387 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 COX20Q5RI15 118 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 PEX5LQ8IYB4 626 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 BHLHE22Q8NFJ8 381 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 NFKBIDQ8NI38 313 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 DOK4Q8TEW6 326 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 GIMAP5Q96F15 307 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 NSMCE2Q96MF7 247 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 NUDT9Q9BW91 350 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 IKZF5Q9H5V7 419 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 ANKRA2Q9H9E1 313 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 HHATLQ9HCP6 504 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 ATP13A2Q9NQ11 1180 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 IL17BQ9UHF5 180 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 CBLCQ9ULV8 474 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 SAMD4AQ9UPU9 718 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 WDR45Q9Y484 360 aa10.39□□□□□ -0.75
SHMT2-220ENST00000555634 MRPS18BQ9Y676 258 aaKnown RBP10.39□□□□□ -0.75
SHMT2-220ENST00000555634 HRKO00198 91 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms