RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 COPS7AQ9UBW8 275 aa8.91□□□□□ -0.98
ACTN1-215ENST00000555616 OSGIN2Q9Y236 505 aa8.91□□□□□ -0.98
ACTN1-215ENST00000555616 YARS2Q9Y2Z4 477 aaKnown RBP8.91□□□□□ -0.98
ACTN1-215ENST00000555616 SCN2AQ99250 2005 aa8.91□□□□□ -0.98
ACTN1-215ENST00000555616 ESPL1Q14674 2120 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 NAV2Q8IVL1 2488 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 C15orf38-AP3S2A0A0A6YYH1 394 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 MYOCOSA0A1B0GUC4 107 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 GYG2O15488 501 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 OR10H2O60403 315 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 OR2J2O76002 312 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 SLITRK5O94991 958 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 CPSF4O95639 269 aaKnown RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 C6orf47O95873 294 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 PORP16435 677 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 GPC1P35052 558 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 FEN1P39748 380 aaKnown RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 FRKP42685 505 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 PHC1P78364 1004 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 CEBPEQ15744 281 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 MPEG1Q2M385 716 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.9□□□□□ -0.984e-6■■□□□ 13.3
ACTN1-215ENST00000555616 SPDYE7PQ495Y7 208 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 PAGE3Q5JUK9 113 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 GFRALQ6UXV0 394 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 DNAJC14Q6Y2X3 702 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 ARPINQ7Z6K5 226 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 OR4N5Q8IXE1 308 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 ST13P4Q8IZP2 240 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 CYP4Z2PQ8N1L4 340 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 TMEM156Q8N614 296 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF321PQ8N8H1 164 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 FAM98AQ8NCA5 519 aaKnown RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 RBM15BQ8NDT2 890 aaKnown RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 ZNF721Q8TF20 911 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 TMEM125Q96AQ2 219 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 LRRC58Q96CX6 371 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 CNRIP1Q96F85 164 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 GPR137Q96N19 417 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 AMDHD1Q96NU7 426 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 DGAT2Q96PD7 388 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 RAB3IPQ96QF0 476 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 RASL10BQ96S79 203 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 SH3GL1Q99961 368 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 HOPXQ9BPY8 73 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 C1orf21Q9H246 121 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 IL1RL2Q9HB29 575 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 SERHLQ9NQF3 203 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 TAS2R9Q9NYW1 312 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 SEC14L3Q9UDX4 400 aa8.9□□□□□ -0.98
ACTN1-215ENST00000555616 PLEKHB1Q9UF11 243 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 KLF13Q9Y2Y9 288 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-215ENST00000555616 A0A1B0GUH1 482 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 WASHC1A8K0Z3 465 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 LRRTM2O43300 516 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 DYRK3O43781 588 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 SCN2BO60939 215 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 OR6B1O95007 311 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ATP1B1P05026 303 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ABCB1P08183 1280 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ZCCHC18P0CG32 403 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 SLC35E2P0CK97 266 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 NQO1P15559 274 aaKnown RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF24P17028 368 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 TNNI3P19429 210 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 EFNA1P20827 205 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 PPIBP23284 216 aaKnown RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 GALNSP34059 522 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 SOAT1P35610 550 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 PER3P56645 1201 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 HBA1P69905 142 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 RNF4P78317 190 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ALDH6A1Q02252 535 aaKnown RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 HSPB3Q12988 150 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 PRSS53Q2L4Q9 553 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 RNFT1Q5M7Z0 435 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 LRIF1Q5T3J3 769 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 FAM180BQ6P0A1 224 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 BHLHB9Q6PI77 547 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 C16orf47Q6ZP98 133 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 DGAT2L6Q6ZPD8 337 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 RINLQ6ZS11 566 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF621Q6ZSS3 439 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF551Q7Z340 670 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 MDGA2Q7Z553 956 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 C9orf40Q8IXQ3 194 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 CCDC116Q8IYX3 515 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 PGAM4Q8N0Y7 254 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ARHGAP24Q8N264 748 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 ZFP62Q8NB50 900 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 POGLUT1Q8NBL1 392 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 OR5L2Q8NGL0 311 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 GOT1L1Q8NHS2 421 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-215ENST00000555616 NUBPLQ8TB37 319 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 UCN3Q969E3 161 aa8.89□□□□□ -0.99
ACTN1-215ENST00000555616 RELTQ969Z4 430 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms