RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 FAM71E1Q6IPT2 247 aa22.32■■□□□ 1.16
PRKCH-216ENST00000555542 TMEM107Q6UX40 140 aa22.32■■□□□ 1.16
PRKCH-216ENST00000555542 LARP4Q71RC2 724 aaKnown RBP eCLIP22.32■■□□□ 1.16
PRKCH-216ENST00000555542 YRDCQ86U90 279 aaKnown RBP22.32■■□□□ 1.16
PRKCH-216ENST00000555542 FAM83FQ8NEG4 500 aaPredicted RBP22.32■■□□□ 1.16
PRKCH-216ENST00000555542 VSTM2LQ96N03 204 aa22.32■■□□□ 1.16
PRKCH-216ENST00000555542 SERHLQ9NQF3 203 aa22.32■■□□□ 1.16
PRKCH-216ENST00000555542 WBP11Q9Y2W2 641 aaKnown RBP22.32■■□□□ 1.16
PRKCH-216ENST00000555542 PTGDR2Q9Y5Y4 395 aa22.32■■□□□ 1.16
PRKCH-216ENST00000555542 HSPB2A8KAH6 182 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 MYO1GB0I1T2 1018 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 PTGDSP41222 190 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 MC3RP41968 323 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 HSPB2Q16082 182 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 SLC25A35Q3KQZ1 300 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 ACSF3Q4G176 576 aaPredicted RBP22.31■■□□□ 1.16
PRKCH-216ENST00000555542 IKBIPQ70UQ0 350 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 ACBD4Q8NC06 268 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 OR14L1PQ8NHC6 308 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 ABTB1Q969K4 478 aaPredicted RBP22.31■■□□□ 1.16
PRKCH-216ENST00000555542 DTNBP1Q96EV8 351 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 TRMOQ9BU70 441 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 GATA5Q9BWX5 397 aaPredicted RBP22.31■■□□□ 1.16
PRKCH-216ENST00000555542 LRTM1Q9HBL6 345 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 DDX18Q9NVP1 670 aaKnown RBP22.31■■□□□ 1.16
PRKCH-216ENST00000555542 C1orf109Q9NX04 203 aa22.31■■□□□ 1.16
PRKCH-216ENST00000555542 CBR3O75828 277 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 SLITRK5O94991 958 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 BMP7P18075 431 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 MRPS22P82650 360 aaKnown RBP22.3■■□□□ 1.16
PRKCH-216ENST00000555542 VASNQ6EMK4 673 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 NPSR1Q6W5P4 371 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 LIX1LQ8IVB5 337 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 GFM2Q969S9 779 aaKnown RBP22.3■■□□□ 1.16
PRKCH-216ENST00000555542 EFHD2Q96C19 240 aaPredicted RBP22.3■■□□□ 1.16
PRKCH-216ENST00000555542 SLC35A4Q96G79 324 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 FAM111AQ96PZ2 611 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 TREX2Q9BQ50 279 aaPredicted RBP22.3■■□□□ 1.16
PRKCH-216ENST00000555542 UGT2B28Q9BY64 529 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 PRDM14Q9GZV8 571 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 EXO1Q9UQ84 846 aaKnown RBP22.3■■□□□ 1.16
PRKCH-216ENST00000555542 MYO9AB2RTY4 2548 aa22.3■■□□□ 1.16
PRKCH-216ENST00000555542 INTS1Q8N201 2190 aaKnown RBP22.29■■□□□ 1.16
PRKCH-216ENST00000555542 A0A087WV62 115 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 EPPINO95925 133 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 NUDT17P0C025 328 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 NEFHP12036 1026 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 IGFBP2P18065 325 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 WNT3P56703 355 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 MYBPHQ13203 477 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 PRSS53Q2L4Q9 553 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 NHSL2Q5HYW2 709 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 TRABD2AQ86V40 505 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 LACC1Q8IV20 430 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 DMRTC2Q8IXT2 367 aaPredicted RBP22.29■■□□□ 1.16
PRKCH-216ENST00000555542 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.29■■□□□ 1.16
PRKCH-216ENST00000555542 METTL2AQ96IZ6 378 aaKnown RBP22.29■■□□□ 1.16
PRKCH-216ENST00000555542 TRIB1Q96RU8 372 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 ZNF559Q9BR84 538 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 GLIPR2Q9H4G4 154 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 MCCC2Q9HCC0 563 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 MKS1Q9NXB0 559 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 TAS2R7Q9NYW3 318 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 WIF1Q9Y5W5 379 aa22.29■■□□□ 1.16
PRKCH-216ENST00000555542 ABCA12Q86UK0 2595 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 DVL2O14641 736 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 TSPAN2O60636 221 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 SPAG7O75391 227 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 ACTL6AO96019 429 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 IL2RAP01589 272 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 LINC00032P0C843 101 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 PRPH2P23942 346 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 ALDH3A1P30838 453 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 PNLIPRP2P54317 469 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 RCAN2Q14206 197 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 ZNHIT3Q15649 155 aaPredicted RBP22.28■■□□□ 1.16
PRKCH-216ENST00000555542 PLCZ1Q86YW0 608 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 DDIASQ8IXT1 998 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 BANPQ8N9N5 519 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 TNIP2Q8NFZ5 429 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 OR4N2Q8NGD1 307 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 NTNG2Q96CW9 530 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 EGLN2Q96KS0 407 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 AMDHD1Q96NU7 426 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 EML4Q9HC35 981 aaKnown RBP22.28■■□□□ 1.16
PRKCH-216ENST00000555542 SLC24A3Q9HC58 644 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 DKKL1Q9UK85 242 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 CCL27Q9Y4X3 112 aa22.28■■□□□ 1.16
PRKCH-216ENST00000555542 BMP5P22003 454 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 TACR1P25103 407 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 GPC1P35052 558 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 RPL38P63173 70 aaKnown RBP22.27■■□□□ 1.16
PRKCH-216ENST00000555542 HSPB3Q12988 150 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 GALNTL6Q49A17 601 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 DCST1Q5T197 706 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 SEM1Q6ZVN7 128 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 IFNEQ86WN2 208 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 WDSUB1Q8N9V3 476 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 LRRC46Q96FV0 321 aa22.27■■□□□ 1.16
PRKCH-216ENST00000555542 WDYHV1Q96HA8 205 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms