RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 RAP2CQ9Y3L5 183 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
SNX6-203ENST00000555416 FREM3P0C091 2139 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 TP53I11O14683 189 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 SCAMP2O15127 329 aaKnown RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 ICOSLGO75144 302 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 REM1O75628 298 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 BCAS2O75934 225 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 TPOP07202 933 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 G6PDP11413 515 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 NAGAP17050 411 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 GRK2P25098 689 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 TRPC1P48995 793 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 TMED10P49755 219 aaKnown RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 PER3P56645 1201 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 DCAF7P61962 342 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 ZNF155Q12901 538 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 ARHGAP11AQ6P4F7 1023 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 EFHD2Q96C19 240 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 ADOQ96SZ5 270 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 SECISBP2Q96T21 854 aaKnown RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 UBQLN3Q9H347 655 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 METTL7AQ9H8H3 244 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 AKTIPQ9H8T0 292 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 PNPLA3Q9NST1 481 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 SIRT3Q9NTG7 399 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 DDX18Q9NVP1 670 aaKnown RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 TAS2R9Q9NYW1 312 aa12.51□□□□□ -0.41
SNX6-203ENST00000555416 BOKQ9UMX3 212 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.51□□□□□ -0.41
SNX6-203ENST00000555416 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 GNB5O14775 395 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 ASMTP46597 345 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 RPL14P50914 215 aaKnown RBP12.5□□□□□ -0.41
SNX6-203ENST00000555416 DIO3P55073 304 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 CASP6P55212 293 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 GAB1Q13480 694 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 GIMAP5Q96F15 307 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 ZNF597Q96LX8 424 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 COL21A1Q96P44 957 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 STMN4Q9H169 189 aaPredicted RBP12.5□□□□□ -0.41
SNX6-203ENST00000555416 EQTNQ9NQ60 294 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
SNX6-203ENST00000555416 MED12Q93074 2177 aa12.5□□□□□ -0.41
SNX6-203ENST00000555416 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 NBPF19A0A087WUL8 3843 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TRGV5A0A0B4J1U4 118 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 OR6C70A6NIJ9 312 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 PRRG2O14669 202 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 COQ9O75208 318 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 SNNO75324 88 aaPredicted RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 SLITRK5O94991 958 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 SNX4O95219 450 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 ESRRAP11474 423 aaPredicted RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 CYP4B1P13584 511 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 GDF1P27539 372 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 PTPN6P29350 595 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 HPCAL1P37235 193 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 MAP3K8P41279 467 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 MAN2A2P49641 1150 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 SLC18A1P54219 525 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 EMX2Q04743 252 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 GXYLT1Q4G148 440 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TBCELQ5QJ74 424 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TMEM198Q66K66 360 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TIGD3Q6B0B8 471 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 LARP4Q71RC2 724 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX6-203ENST00000555416 MRGPRGQ86SM5 289 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 WDSUB1Q8N9V3 476 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 FBXO30Q8TB52 745 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 RNF138Q8WVD3 245 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 MTERF3Q96E29 417 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 TMEM41AQ96HV5 264 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 LMF2Q9BU23 707 aaKnown RBP12.49□□□□□ -0.41
SNX6-203ENST00000555416 OSBPL11Q9BXB4 747 aa12.49□□□□□ -0.41
SNX6-203ENST00000555416 ACSS1Q9NUB1 689 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms