RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 SLC48A1Q6P1K1 146 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 C20orf204Q6ZNR8 217 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 C22orf34Q6ZV56 151 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 CYS1Q717R9 158 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 CHMP1BQ7LBR1 199 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 RHEBL1Q8TAI7 183 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 KLHL29Q96CT2 875 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 TMCO6Q96DC7 493 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 MRRFQ96E11 262 aaKnown RBP11.85□□□□□ -0.51
XRCC3-212ENST00000555231 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 ADOQ96SZ5 270 aa11.85□□□□□ -0.51
XRCC3-212ENST00000555231 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 OR6C70A6NIJ9 312 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 SLC22A20A6NK97 555 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 H0YC42 278 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 ZIC3O60481 467 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 ATP1B1P05026 303 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 DRD5P21918 477 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 DPP4P27487 766 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 UGT2B10P36537 528 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 EMDP50402 254 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 CCNG1P51959 295 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 NR1H2P55055 460 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 TPD52P55327 224 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 FAM83EQ2M2I3 478 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 MROH9Q5TGP6 573 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 OR2A2Q6IF42 318 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 CCDC25Q86WR0 208 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 METTL4Q8N3J2 472 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 PTGR2Q8N8N7 351 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 CNRIP1Q96F85 164 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 ZNF845Q96IR2 970 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-212ENST00000555231 MARK4Q96L34 752 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 GSX2Q9BZM3 304 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 AHSPQ9NZD4 102 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 PRODH2Q9UF12 536 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 COL6A5A8TX70 2615 aa11.84□□□□□ -0.51
XRCC3-212ENST00000555231 A0A087X1B8 175 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 FRG2CA6NGY1 282 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 C16orf97H3BN30 126 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 TO15178 435 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 SEC14L5O43304 696 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 TSPAN2O60636 221 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 CRHP06850 196 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 GSTA2P09210 222 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 GRK2P25098 689 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 ALDH9A1P49189 494 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 SUCLG1P53597 346 aaKnown RBP11.83□□□□□ -0.52
XRCC3-212ENST00000555231 CLDN15P56746 228 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 CORO7P57737 925 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 ACAP2Q15057 778 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 PLEKHM3Q6ZWE6 761 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 COMMD6Q7Z4G1 85 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 ZNF610Q8N9Z0 462 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 OR4K17Q8NGC6 315 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 OR5M1Q8NGP8 315 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 TM4SF18Q96CE8 201 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 PHF21BQ96EK2 531 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 SLC35A4Q96G79 324 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 NSUN5Q96P11 429 aaKnown RBP11.83□□□□□ -0.52
XRCC3-212ENST00000555231 ERP44Q9BS26 406 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 PINK1Q9BXM7 581 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 KLHL4Q9C0H6 718 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 DSN1Q9H410 356 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 PFDN4Q9NQP4 134 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 FARSBQ9NSD9 589 aaKnown RBP11.83□□□□□ -0.52
XRCC3-212ENST00000555231 ELOVL5Q9NYP7 299 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 GRHL1Q9NZI5 618 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 WHRNQ9P202 907 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 SLC12A4Q9UP95 1085 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 GPR55Q9Y2T6 319 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-212ENST00000555231 TNPO3Q9Y5L0 923 aaKnown RBP11.83□□□□□ -0.52
XRCC3-212ENST00000555231 SAR1BQ9Y6B6 198 aa11.83□□□□□ -0.52
XRCC3-212ENST00000555231 A0A096LPK6 155 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 SCO2O43819 266 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 GUCY1B2O75343 617 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 CRLF1O75462 422 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 KLHL2O95198 593 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 PLAUP00749 431 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 CGAP01215 116 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 PEPDP12955 493 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 PAFAH1B1P43034 410 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 PCYT1AP49585 367 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 GAS1P54826 345 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 GALNT1Q10472 559 aaPredicted RBP11.82□□□□□ -0.52
XRCC3-212ENST00000555231 IFT88Q13099 833 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 TRAF3Q13114 568 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 BCL2A1Q16548 175 aa11.82□□□□□ -0.52
XRCC3-212ENST00000555231 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms