RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 EIF2B3Q9NR50 452 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ELOVL5Q9NYP7 299 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PAK5Q9P286 719 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 FETUBQ9UGM5 382 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TMA7Q9Y2S6 64 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 MED16Q9Y2X0 877 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SLC6A5Q9Y345 797 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PCDHA13Q9Y5I0 950 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CHCHD2Q9Y6H1 151 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 SNRNP200O75643 2136 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 A0A0A6YYJ9 748 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 IQANK1A0A1B0GTG1 560 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MAGEB16A2A368 324 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CTAGE15A4D2H0 777 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 LRIT2A6NDA9 550 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 PABPN1LA6NDY0 278 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 LRRC14BA6NHZ5 514 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 BTNL10A8MVZ5 291 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 C16orf97H3BN30 126 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CDH16O75309 829 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ETHE1O95571 254 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 IGKV3-11P04433 115 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CRHP06850 196 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 COX7A2P14406 83 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ETS1P14921 441 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 NR4A1P22736 598 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MGAT1P26572 445 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 LOXP28300 417 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 HPDP32754 393 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 UGT2B10P36537 528 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 SLCO1A2P46721 670 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MASP1P48740 699 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 NAGLUP54802 743 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MTTPP55157 894 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 LIM2P55344 173 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 AP1S2P56377 157 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 REEP5Q00765 189 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 THOC5Q13769 683 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TOMM20Q15388 145 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 SPA17Q15506 151 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 OASLQ15646 514 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 NTRK2Q16620 822 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 EIPR1Q53HC9 387 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 PRAMEF9Q5VWM5 478 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ENPP6Q6UWR7 440 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 C4orf22Q6V702 233 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MBOAT1Q6ZNC8 495 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CTAGE6Q86UF2 777 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 GSPT2Q8IYD1 628 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TAGAPQ8N103 731 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MYO1HQ8N1T3 1032 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 UBL4BQ8N7F7 174 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF611Q8N823 705 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CCDC89Q8N998 374 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 FAM47BQ8NA70 645 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TTLQ8NG68 377 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 CD200R1Q8TD46 325 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 EEF1AKMT1Q8WVE0 214 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ANKRD7Q92527 254 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 NEIL2Q969S2 332 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 FBXL8Q96CD0 374 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 REPS1Q96D71 796 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 STARD4Q96DR4 205 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TRMT61AQ96FX7 289 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MARK4Q96L34 752 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF597Q96LX8 424 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 QRFPRQ96P65 431 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 FAM111AQ96PZ2 611 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 OR4K3Q96R72 315 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 SERINC2Q96SA4 455 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MNTQ99583 582 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TUBA1CQ9BQE3 449 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ANGPTL4Q9BY76 406 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 AICDAQ9GZX7 198 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 SPNS1Q9H2V7 528 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 HOMER3Q9NSC5 361 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TMEM160Q9NX00 188 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 PSD3Q9NYI0 1048 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 WWOXQ9NZC7 414 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 TRMT6Q9UJA5 497 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 AMFRQ9UKV5 643 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 DAPP1Q9UN19 280 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 C15orf41Q9Y2V0 281 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 KCNE2Q9Y6J6 123 aa4.36□□□□□ -1.71
ATXN3-229ENST00000554672 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
ATXN3-229ENST00000554672 MPDZO75970 2070 aa4.35□□□□□ -1.71
ATXN3-229ENST00000554672 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.35□□□□□ -1.71
ATXN3-229ENST00000554672 A0A0G2JN53 185 aa4.35□□□□□ -1.71
ATXN3-229ENST00000554672 A0A1W2PNV4 684 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms