RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FBXL20Q96IG2 436 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 C3orf30Q96M34 536 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 DOCK7Q96N67 2140 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 DGAT2Q96PD7 388 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 RPF2Q9H7B2 306 aaKnown RBP9.72□□□□□ -0.85
SHMT2-215ENST00000554656 ASIC5Q9NY37 505 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 ARMCX1Q9P291 453 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 COPS7AQ9UBW8 275 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 KCNN3Q9UGI6 736 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 CNOT11Q9UKZ1 510 aaKnown RBP9.72□□□□□ -0.85
SHMT2-215ENST00000554656 RNF11Q9Y3C5 154 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 L3MBTL1Q9Y468 752 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 CHCHD2Q9Y6H1 151 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-215ENST00000554656 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.72□□□□□ -0.85
SHMT2-215ENST00000554656 ACANP16112 2415 aa9.72□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF469Q96JG9 3925 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-215ENST00000554656 A0A0A6YYD5 115 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 TRGV5A0A0B4J1U4 118 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 LINC00032P0C843 101 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 COX4I1P13073 169 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 PIK3R1P27986 724 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 SERPINB1P30740 379 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ZFP36L2P47974 494 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 MAN2A2P49641 1150 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 HTR6P50406 440 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 SLC37A1P57057 533 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 RPS13P62277 151 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 PLIN5Q00G26 463 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 EMX2Q04743 252 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 SNTB1Q13884 538 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 EBPQ15125 230 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 DNAL1Q4LDG9 190 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ATP6AP1LQ52LC2 224 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 C6orf136Q5SQH8 315 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 C1orf185Q5T7R7 199 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 FRG2Q64ET8 278 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 Q6ZSR9 355 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 GPR180Q86V85 440 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ARHGAP24Q8N264 748 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 LRRC25Q8N386 305 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 FBXW8Q8N3Y1 598 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ZCCHC7Q8N3Z6 543 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 OR10G3Q8NGC4 313 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 OR10Q1Q8NGQ4 319 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 UBE2E3Q969T4 207 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 REPS1Q96D71 796 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 PPP1R36Q96LQ0 422 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 CDK15Q96Q40 435 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 RAB3IPQ96QF0 476 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 FRG2BQ96QU4 278 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 MTERF1Q99551 399 aaKnown RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ZNF559Q9BR84 538 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 BTBD10Q9BSF8 475 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 BRINP2Q9C0B6 783 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 WWTR1Q9GZV5 400 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 MMADHCQ9H3L0 296 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-215ENST00000554656 BRF2Q9HAW0 419 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 AIG1Q9NVV5 245 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 NDE1Q9NXR1 346 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ERVK-19Q9WJR5 959 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 TMED5Q9Y3A6 229 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 CCL27Q9Y4X3 112 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 ASB4Q9Y574 426 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 MPDZO75970 2070 aa9.71□□□□□ -0.86
SHMT2-215ENST00000554656 A0A1W2PR48 441 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 GLOD5A6NK44 160 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 LSM1O15116 133 aaKnown RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 PROM1O43490 865 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 HCN1O60741 890 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 WDR1O75083 606 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 RSL1D1O76021 490 aaKnown RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 AIFM1O95831 613 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ALDOCP09972 364 aaKnown RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 COX7A2P14406 83 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 DNAJA1P31689 397 aaKnown RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 BSGP35613 385 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 PIK3CBP42338 1070 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 RAP1GDS1P52306 607 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 WNT3P56703 355 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 STX5Q13190 355 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 MYBPHQ13203 477 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ZNF267Q14586 743 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 PDCD4Q53EL6 469 aaKnown RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 COQ5Q5HYK3 327 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 FAM219BQ5XKK7 198 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SLC22A10Q63ZE4 541 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 TMEM198Q66K66 360 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 BICRALQ6AI39 1079 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 TMEM64Q6YI46 380 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 TMEM200AQ86VY9 491 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ST13P4Q8IZP2 240 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ZNF441Q8N8Z8 693 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 RELL2Q8NC24 303 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 NAXEQ8NCW5 288 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms