RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 MYOCOSA0A1B0GUC4 107 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 A1L4Q6 167 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 FOXE1O00358 373 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CDK2AP1O14519 115 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 LRRTM2O43300 516 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 LDLRP01130 860 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 RNF224P0DH78 156 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 HOXB9P17482 250 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CPN2P22792 545 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 TACR1P25103 407 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 PSMA4P25789 261 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 TPP2P29144 1249 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 PPP2R1BP30154 601 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ASMTP46597 345 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 MLF1P58340 268 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 SRSF11Q05519 484 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ACSM2AQ08AH3 577 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ELAVL1Q15717 326 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 C4orf17Q53FE4 359 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 SPIN4Q56A73 249 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 DEPDC1Q5TB30 811 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ACSM2BQ68CK6 577 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 OR4C11Q6IEV9 310 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ZNF793Q6ZN11 406 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 UBE3DQ7Z6J8 389 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 SPPL2CQ8IUH8 684 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ADGRG5Q8IZF4 528 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 RNF175Q8N4F7 328 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ANKFN1Q8N957 763 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 PAPD5Q8NDF8 572 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CHTF18Q8WVB6 975 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CANT1Q8WVQ1 401 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 DAZLQ92904 295 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 NCLNQ969V3 563 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 VMP1Q96GC9 406 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CCDC115Q96NT0 180 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 TSSK3Q96PN8 268 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 MAPKAP1Q9BPZ7 522 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 HES7Q9BYE0 225 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 ALOXE3Q9BYJ1 711 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 PAIP1Q9H074 479 aaKnown RBP11.54□□□□□ -0.56
SHMT2-214ENST00000554604 DMRT3Q9NQL9 472 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 KCMF1Q9P0J7 381 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 VAPAQ9P0L0 249 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 SEC14L3Q9UDX4 400 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 RAB26Q9ULW5 256 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 PPT2Q9UMR5 302 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 CRYBG3Q68DQ2 2970 aa11.54□□□□□ -0.56
SHMT2-214ENST00000554604 A0A1B0GUH1 482 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TGFBR3LH3BV60 316 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 LDB3O75112 727 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SLC25A12O75746 678 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SCELO95171 688 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SP1P08047 785 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 FCGR1AP12314 374 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 BMP2P12643 396 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TNNI3P19429 210 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 GGT1P19440 569 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 PTX3P26022 381 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TLX1P31314 330 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TRPC1P48995 793 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 HLCSP50747 726 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TDGF1P3P51864 188 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 RPS13P62277 151 aaKnown RBP11.53□□□□□ -0.56
SHMT2-214ENST00000554604 PHC1P78364 1004 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 RBPJQ06330 500 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SLAMF1Q13291 335 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SERTAD2Q14140 314 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SELPLGQ14242 412 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SLC25A25Q6KCM7 469 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 GALNTL5Q7Z4T8 443 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 GPR180Q86V85 440 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 CLHC1Q8NHS4 586 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 NUDT8Q8WV74 236 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 LRTOMTQ8WZ04 291 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 POP5Q969H6 163 aaKnown RBP11.53□□□□□ -0.56
SHMT2-214ENST00000554604 NSMCE2Q96MF7 247 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 TRIM8Q9BZR9 551 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 Q9H521 79 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SERHLQ9NQF3 203 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 MS4A12Q9NXJ0 267 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 SLC25A37Q9NYZ2 338 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-214ENST00000554604 PHF11Q9UIL8 331 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 ZNF407Q9C0G0 2248 aa11.53□□□□□ -0.56
SHMT2-214ENST00000554604 WIPF3A6NGB9 483 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 PLPP1O14494 284 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 DENRO43583 198 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ITGA10O75578 1167 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms