RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SLC48A1Q6P1K1 146 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 LSMEM1Q8N8F7 131 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 SNX18Q96RF0 628 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 DHRS9Q9BPW9 319 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ROGDIQ9GZN7 287 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 FAM60AQ9NP50 221 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 NECTIN3Q9NQS3 549 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 OSGIN1Q9UJX0 560 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 CES1P1Q9UKY3 287 aa10.98□□□□□ -0.65
SHMT2-212ENST00000554467 ISPDA4D126 451 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 M0R3H8 397 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SEMA7AO75326 666 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 GLULP15104 373 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CRB2Q5IJ48 1285 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF691Q5VV52 312 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 AGAP6Q5VW22 663 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CCDC71Q8IV32 467 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 LGI4Q8N135 537 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZDHHC1Q8WTX9 485 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SLC22A18Q96BI1 424 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZG16BQ96DA0 208 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 AGAP4Q96P64 663 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 PRDM6Q9NQX0 595 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ACSS1Q9NUB1 689 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZDBF2Q9HCK1 2354 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 FRS3O43559 492 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 NR2F6P10588 404 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CPN2P22792 545 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 HTR3AP46098 478 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 IDH2P48735 452 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 UBE2IP63279 158 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 FZD5Q13467 585 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SMAD2Q15796 467 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CCDC103Q8IW40 242 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 OR10G2Q8NGC3 310 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 KLHL6Q8WZ60 621 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 TTYH2Q9BSA4 534 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SEC14L3Q9UDX4 400 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF221Q9UK13 617 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 PCDHGB3Q9Y5G1 929 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 MEN1O00255 615 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 FFAR1O14842 300 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ST6GAL1P15907 406 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 NUDT6P53370 316 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CDK5R2Q13319 367 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 GPAT3Q53EU6 434 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 MEX3DQ86XN8 651 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 LMX1AQ8TE12 382 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 GEMIN6Q8WXD5 167 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 HLA-CQ95604 372 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 GAL3ST3Q96A11 431 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 CAPN10Q9HC96 672 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SLC2A4RGQ9NR83 387 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 TAS2R7Q9NYW3 318 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 SLC6A14Q9UN76 642 aa10.97□□□□□ -0.65
SHMT2-212ENST00000554467 WBP11Q9Y2W2 641 aaKnown RBP10.97□□□□□ -0.65
SHMT2-212ENST00000554467 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 OR2W5A6NFC9 320 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 CASC3O15234 703 aaKnown RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 TBX19O60806 448 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 KRT8P05787 483 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 CHRM4P08173 479 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 CSNK2A2P19784 350 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 POU3F3P20264 500 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 CCR5P51681 352 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 TRA2BP62995 288 aaKnown RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 RPP38P78345 283 aaKnown RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 FUT5Q11128 374 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 FAM111BQ6SJ93 734 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 PARGQ86W56 976 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 GALNT12Q8IXK2 581 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 TMEM52Q8NDY8 209 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 RNF170Q96K19 258 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 A4GALTQ9NPC4 353 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 PAQR5Q9NXK6 330 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-212ENST00000554467 SCN3BQ9NY72 215 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF780BQ9Y6R6 833 aa10.96□□□□□ -0.65
SHMT2-212ENST00000554467 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 IFNW1P05000 195 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 HSMCR30P0CW71 290 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 PTNP21246 168 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 XKP51811 444 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 LEXMQ3ZCV2 418 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 AVL9Q8NBF6 648 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 RERGQ96A58 199 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 TBC1D20Q96BZ9 403 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 ARSGQ96EG1 525 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 RDH12Q96NR8 316 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 ZFYVE21Q9BQ24 234 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 SARGQ9BW04 601 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 GABARAPL1Q9H0R8 117 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 ACER3Q9NUN7 267 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 UNC13CQ8NB66 2214 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 TRBV4-1A0A0J9YWV2 114 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 C2orf74A8MZ97 194 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 SGK494L7N484 410 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms