RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CT45A9P0DMV2 189 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC2A3P11169 496 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 DBTP11182 482 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 MBL2P11226 248 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 GCFC2P16383 781 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 GPX3P22352 226 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ACKR3P25106 362 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PSMA2P25787 234 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PTBP1P26599 531 aaKnown RBP eCLIP1.97□□□□□ -2.092e-8■■■■□ 23
SRP54-204ENST00000553923 RBMS1P29558 406 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 TRIM23P36406 574 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 FDFT1P37268 417 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 MATKP42679 507 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SSR1P43307 286 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 MAGEA8P43361 318 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 DNA2P51530 1060 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SEC61GP60059 68 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 EIF3EP60228 445 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 BTG1P62324 171 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 NOP14P78316 857 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 ENPEPQ07075 957 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ASPHQ12797 758 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 MSLNQ13421 630 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 IDI1Q13907 227 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 HERC3Q15034 1050 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 HKDC1Q2TB90 917 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 GPR33Q49SQ1 333 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RAB6CQ53S08 254 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CT45A2Q5DJT8 189 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 FGD3Q5JSP0 725 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZNF776Q68DI1 518 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 TMEM225Q6GV28 225 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PYHIN1Q6K0P9 492 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CAPN13Q6MZZ7 669 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 WASH2PQ6VEQ5 465 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 IL17RELQ6ZVW7 336 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 Q71RC1 249 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC24A5Q71RS6 500 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 Q7L0L9 218 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ASRGL1Q7L266 308 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 COX8CQ7Z4L0 72 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 GOLGA7Q7Z5G4 137 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZNF554Q86TJ5 538 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CDR2LQ86X02 465 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 VSTM4Q8IW00 320 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CCDC60Q8IWA6 550 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 GPALPP1Q8IXQ4 340 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC38A6Q8IZM9 456 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ELMOD1Q8N336 334 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 TCEANCQ8N8B7 351 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ANKFN1Q8N957 763 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 COLGALT1Q8NBJ5 622 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR7A2PQ8NGA2 310 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR5D13Q8NGL4 314 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR13C3Q8NGS6 347 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RAB3IL1Q8TBN0 382 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RAET1EQ8TD07 263 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC2A14Q8TDB8 520 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 GRHL3Q8TE85 626 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SMPDL3AQ92484 453 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC35C1Q96A29 364 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PCED1BQ96HM7 432 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PIWIL1Q96J94 861 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 AKR1E2Q96JD6 320 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SGK494Q96LW2 274 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 AMDHD1Q96NU7 426 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PANX1Q96RD7 426 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RHOXF2Q9BQY4 288 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLC39A3Q9BRY0 314 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 TRIM51Q9BSJ1 452 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 NDUFAF3Q9BU61 184 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 TRIM9Q9C026 710 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 RAB6CQ9H0N0 254 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ARRDC1-AS1Q9H2J1 176 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 EHD1Q9H4M9 534 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 XKR8Q9H6D3 395 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 HAUS4Q9H6D7 363 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SYNDIG1Q9H7V2 258 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SIX2Q9NPC8 291 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 UBE2TQ9NPD8 197 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 GDF3Q9NR23 364 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 POLE4Q9NR33 117 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 CHRAC1Q9NRG0 131 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 OR6C2Q9NZP2 312 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 SPATA7Q9P0W8 599 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 LHX3Q9UBR4 397 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZMAT5Q9UDW3 170 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 EPHA6Q9UF33 1036 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZDHHC2Q9UIJ5 367 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 POMT2Q9UKY4 750 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZNF346Q9UL40 294 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 PACSIN2Q9UNF0 486 aaPredicted RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 NIP7Q9Y221 180 aaKnown RBP eCLIP1.97□□□□□ -2.09
SRP54-204ENST00000553923 EXOGQ9Y2C4 368 aaKnown RBP1.97□□□□□ -2.09
SRP54-204ENST00000553923 SLCO1B1Q9Y6L6 691 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 PIK3R4Q99570 1358 aa1.97□□□□□ -2.09
SRP54-204ENST00000553923 ZMYM6O95789 1325 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 IL16Q14005 1332 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PHLPP2Q6ZVD8 1323 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 FAM240BA0A1B0GVZ2 78 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms