RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 NDRG3Q9UGV2 375 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 SLC6A5Q9Y345 797 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 TMED5Q9Y3A6 229 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 LRRK2Q5S007 2527 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 FLNCQ14315 2725 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 ZGRF1Q86YA3 2104 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 COL12A1Q99715 3063 aa5.95□□□□□ -1.46
FOXN3-205ENST00000553904 A0A1B0GTL3 188 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 A0A1W2PPM1 405 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 A0A1W2PS29 197 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TLDC2A0PJX2 215 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MBD3L4A6NDZ8 208 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MBD3L3A6NE82 208 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MBD3L5A6NJ08 208 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MYO1GB0I1T2 1018 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TMEM114B3SHH9 223 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 G3V2L1 256 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 H0Y3Z8 333 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TSPAN2O60636 221 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TRIM13O60858 407 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 UGT2B11O75310 529 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 LRATO95237 230 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 HSPA4LO95757 839 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CRHP06850 196 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 FGF4P08620 206 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CT45A8P0DMV1 189 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CT45A9P0DMV2 189 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NEFHP12036 1026 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 PEPDP12955 493 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CHN1P15882 459 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 KRT4P19013 534 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ENDOUP21128 410 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 DPP4P27487 766 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MAPK1P28482 360 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 GPC1P35052 558 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 RPL3P39023 403 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ASMTP46597 345 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MANFP55145 182 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 RAE1P78406 368 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MRPS35P82673 323 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SRYQ05066 204 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 IFFO1Q0D2I5 559 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 C17orf67Q0P5P2 114 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 GANABQ14697 944 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NNATQ16517 81 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 GLYR1Q49A26 553 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ACSF3Q4G176 576 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 FLYWCH1Q4VC44 716 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 EIPR1Q53HC9 387 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CT45A2Q5DJT8 189 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ZNF628Q5EBL2 1059 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TCHHL1Q5QJ38 904 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SH2D4BQ5SQS7 431 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 FNDC7Q5VTL7 733 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 LIPMQ5VYY2 423 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 BICRALQ6AI39 1079 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 OR2A2Q6IF42 318 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NOXRED1Q6NXP6 359 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ZCCHC12Q6PEW1 402 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MYO7BQ6PIF6 2116 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SPNS3Q6ZMD2 512 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 FRMD7Q6ZUT3 714 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 R3HCC1LQ7Z5L2 792 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CAMKMTQ7Z624 323 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 YRDCQ86U90 279 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 LIX1LQ8IVB5 337 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MEIOBQ8N635 442 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 WDSUB1Q8N9V3 476 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CHDHQ8NE62 594 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TNIP2Q8NFZ5 429 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 OR4K17Q8NGC6 315 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 OR9A2Q8NGT5 310 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MBD3L2Q8NHZ7 208 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CDC26Q8NHZ8 85 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 KAT2AQ92830 837 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NINJ1Q92982 152 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 WNT2BQ93097 391 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NTNG2Q96CW9 530 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ZBED6CLQ96FA7 236 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 VSTM2LQ96N03 204 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SFXN2Q96NB2 322 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 UCN2Q96RP3 112 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 PRPF18Q99633 342 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 CCT7Q99832 543 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SFXN3Q9BWM7 321 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 TXLNGYQ9BZA5 131 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ROPN1BQ9BZX4 212 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 OR2B2Q9GZK3 357 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 GSTO2Q9H4Y5 243 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 ROPN1Q9HAT0 212 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 FOLH1BQ9HBA9 442 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 LRTM1Q9HBL6 345 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 MYNNQ9NPC7 610 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 SERHLQ9NQF3 203 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 NPDC1Q9NQX5 325 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 DDX18Q9NVP1 670 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 C1orf109Q9NX04 203 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 DNAJB12Q9NXW2 375 aaKnown RBP5.94□□□□□ -1.46
FOXN3-205ENST00000553904 PPP4R1LQ9P1A2 415 aa5.94□□□□□ -1.46
FOXN3-205ENST00000553904 DKKL1Q9UK85 242 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms