RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 HORMAD2Q8N7B1 307 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 OR5D16Q8NGK9 328 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 HSPBAP1Q96EW2 488 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 SLC35A4Q96G79 324 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 ZNF354BQ96LW1 612 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 OR7D2Q96RA2 312 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 LMF1Q96S06 567 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 RASL10BQ96S79 203 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 SMAD5Q99717 465 aaKnown RBP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 YIPF4Q9BSR8 244 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 TRIM8Q9BZR9 551 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 OR51I1Q9H343 314 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 CDCP1Q9H5V8 836 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 NANOGQ9H9S0 305 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 GID8Q9NWU2 228 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 KCNE3Q9Y6H6 103 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 PRAMEF27A3QJZ7 478 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 A6NL46 340 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 A8MUI8 341 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 TNFRSF21O75509 655 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 OR2J2O76002 312 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 ALOX5P09917 674 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 ESRRAP11474 423 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 CPOXP36551 454 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 KHKP50053 298 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 NR0B1P51843 470 aaKnown RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 CASP9P55211 416 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 MTPNP58546 118 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 FUT5Q11128 374 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 RAPSNQ13702 412 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 ZNHIT3Q15649 155 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 LINC00303Q3SY05 128 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 HLA-DQA1Q5Y7H0 255 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 HEPHL1Q6MZM0 1159 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 SLC44A2Q8IWA5 706 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 SLC15A4Q8N697 577 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 OR4N2Q8NGD1 307 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 FAM110BQ8TC76 370 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 EXTL1Q92935 676 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 OTUB1Q96FW1 271 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 RAD21L1Q9H4I0 556 aa16.65■□□□□ 0.26
PSEN1-208ENST00000553719 KAT8Q9H7Z6 458 aaKnown RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 TRIM45Q9H8W5 580 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 FAF1Q9UNN5 650 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 YARS2Q9Y2Z4 477 aaKnown RBP16.65■□□□□ 0.26
PSEN1-208ENST00000553719 GXYLT2A0PJZ3 443 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CDK2AP1O14519 115 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 SOX30O94993 753 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 FBXO45P0C2W1 286 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ABCD3P28288 659 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 GZMMP51124 257 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 POLE2P56282 527 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 GABPB1Q06547 395 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 BNIP1Q12981 228 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 MFAP5Q13361 173 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 MAPK11Q15759 364 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CYP27C1Q4G0S4 372 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 RABL3Q5HYI8 236 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ZNF468Q5VIY5 522 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 AGAP7PQ5VUJ5 663 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 IRAK1BP1Q5VVH5 260 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 AP1ARQ63HQ0 302 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 TNFAIP8L2Q6P589 184 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ISLR2Q6UXK2 745 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 SLC34A3Q8N130 599 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 BEST3Q8N1M1 668 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CHDHQ8NE62 594 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 PIK3R3Q92569 461 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 SLC9A6Q92581 669 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 TTC9Q92623 222 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CDS1Q92903 461 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 TMEM125Q96AQ2 219 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 AGAP4Q96P64 663 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 HOPXQ9BPY8 73 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ZBTB20Q9HC78 741 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-208ENST00000553719 Q9N2J8 555 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CMTM6Q9NX76 183 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 ABCD2Q9UBJ2 740 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 CORO2BQ9UQ03 480 aa16.64■□□□□ 0.25
PSEN1-208ENST00000553719 C15orf38-AP3S2A0A0A6YYH1 394 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 DUXAA6NLW8 204 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 TSPAN2O60636 221 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 IGKV1D-16P01601 117 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 NUDT7P0C024 238 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 OR12D1P0DN82 309 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 ETFAP13804 333 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 NAGAP17050 411 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 GABRA3P34903 492 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 PIGAP37287 484 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 SSR4P51571 173 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 MNAT1P51948 309 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
PSEN1-208ENST00000553719 ART3Q13508 389 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 ADRM1Q16186 407 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 ST3GAL2Q16842 350 aa16.63■□□□□ 0.25
PSEN1-208ENST00000553719 ANGPTL8Q6UXH0 198 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms