RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 KCTD4Q8WVF5 259 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 TMCO6Q96DC7 493 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 COL21A1Q96P44 957 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ADOQ96SZ5 270 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SERPINI1Q99574 410 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SLC39A3Q9BRY0 314 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 KLHL4Q9C0H6 718 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 IPPKQ9H8X2 491 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ANKRA2Q9H9E1 313 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SAYSD1Q9NPB0 183 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF701Q9NV72 531 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CES1P1Q9UKY3 287 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CFL2Q9Y281 166 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SNX24Q9Y343 169 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ZANQ9Y493 2812 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 OR6C70A6NIJ9 312 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SYCE1LA8MT33 242 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 TO15178 435 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SEC14L5O43304 696 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 EMC8O43402 210 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 KLF4O43474 513 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SOX30O94993 753 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SIX3O95343 332 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 CD8BP10966 210 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 DRD5P21918 477 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SPRP35270 261 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 ARL1P40616 181 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PPICP45877 212 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SUCLG1P53597 346 aaKnown RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 MAPK12P53778 367 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 GAS1P54826 345 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 ALDH18A1P54886 795 aaKnown RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 CORO7P57737 925 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 MRPS25P82663 173 aaKnown RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 VEZF1Q14119 521 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 BCL2A1Q16548 175 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 EXOC3L2Q2M3D2 409 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 BEX5Q5H9J7 111 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 CCNYL2Q5T2Q4 361 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 FAM219BQ5XKK7 198 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 HMBOX1Q6NT76 420 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PPM1NQ8N819 430 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 FNDC9Q8TBE3 224 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 CAVIN3Q969G5 261 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 KLHL29Q96CT2 875 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 SLC35A4Q96G79 324 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PINK1Q9BXM7 581 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 CXorf56Q9H5V9 222 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 RNF122Q9H9V4 155 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PSD3Q9NYI0 1048 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PRODH2Q9UF12 536 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 ADAM29Q9UKF5 820 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 GPR55Q9Y2T6 319 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 MRPS18CQ9Y3D5 142 aaKnown RBP8.18□□□□□ -1.1
SYNE2-209ENST00000553308 PCDHA9Q9Y5H5 950 aa8.18□□□□□ -1.1
SYNE2-209ENST00000553308 A0A087X1B8 175 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 C1orf226A1L170 272 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 OR7A17O14581 309 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 HS3ST1O14792 307 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 SCO2O43819 266 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 TSPAN2O60636 221 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 CLDN9O95484 217 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 PEPDP12955 493 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 TCP1P17987 556 aaKnown RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 TBXA2RP21731 343 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 CRABP2P29373 138 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 IL12BP29460 328 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 DEKP35659 375 aaKnown RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 DSCR4P56555 118 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 PON3Q15166 354 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 GUSBP1Q15486 140 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 GRTP1Q5TC63 336 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 RAET1LQ5VY80 246 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 FRG2Q64ET8 278 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 HEPHL1Q6MZM0 1159 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 NPSR1Q6W5P4 371 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 C3orf62Q6ZUJ4 267 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 LARP4Q71RC2 724 aaKnown RBP eCLIP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 PAGE2Q7Z2X7 111 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 COMMD6Q7Z4G1 85 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 METTL4Q8N3J2 472 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 OR4K17Q8NGC6 315 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 OR5M1Q8NGP8 315 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 RHEBL1Q8TAI7 183 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 RNF138Q8WVD3 245 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 DTNBP1Q96EV8 351 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 CNRIP1Q96F85 164 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF681Q96N22 645 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 BTBD9Q96Q07 612 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 FRG2BQ96QU4 278 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 LRRC1Q9BTT6 524 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 DSN1Q9H410 356 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 NOL11Q9H8H0 719 aaKnown RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 PPP4R1LQ9P1A2 415 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms