RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 WDR55Q9H6Y2 383 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 NEUROD4Q9HD90 331 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 SNX8Q9Y5X2 465 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 EXPH5Q8NEV8 1989 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 HIVEP3Q5T1R4 2406 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 ANKRD33BA6NCL7 494 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 PSMG1O95456 288 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 ABOP16442 354 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 EFR3AQ14156 821 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 SPDYE7PQ495Y7 208 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 VPS26BQ4G0F5 336 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 TMEM198Q66K66 360 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 PACS2Q86VP3 889 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 RIMKLAQ8IXN7 391 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 FAM109AQ8N4B1 249 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 NUP43Q8NFH3 380 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 COQ8BQ96D53 544 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 TMCO6Q96DC7 493 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 RILPQ96NA2 401 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 ZCCHC3Q9NUD5 404 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 KLRF1Q9NZS2 232 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 MRTO4Q9UKD2 239 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 NINQ8N4C6 2090 aa16.97■□□□□ 0.31
PRPF40B-216ENST00000552301 TRGV8A0A0C4DH27 118 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 OR6C70A6NIJ9 312 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 DIAPH2O60879 1101 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 UGT2B11O75310 529 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 SNX4O95219 450 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 C6orf47O95873 294 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 SOAT1P35610 550 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 KIR3DL1P43629 444 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 PSG6Q00889 435 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 UBAP2LQ14157 1087 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 DECR1Q16698 335 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 DPY19L1Q2PZI1 675 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 CYP27C1Q4G0S4 372 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 BICRALQ6AI39 1079 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 ACAD11Q709F0 780 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 WDR53Q7Z5U6 358 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 CAMKMTQ7Z624 323 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 CDRT4Q8N9R6 151 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 JADE3Q92613 823 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 CHMP6Q96FZ7 201 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 ADOQ96SZ5 270 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 ZBTB18Q99592 522 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 LMF2Q9BU23 707 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 OSBPL11Q9BXB4 747 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 DEFB127Q9H1M4 99 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 ZFP64Q9NPA5 681 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 AIG1Q9NVV5 245 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 CBLCQ9ULV8 474 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 PCDHGB4Q9UN71 923 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 SLC5A6Q9Y289 635 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 USH1CQ9Y6N9 552 aa16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 SPENQ96T58 3664 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-216ENST00000552301 FLNBO75369 2602 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 A0A1B0GUH1 482 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 PRAMEF25A6NGN4 478 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC19A2O60779 497 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 GLSO94925 669 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 ALDOCP09972 364 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 GABRA3P34903 492 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 CASP3P42574 277 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 RFX3P48380 749 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 PRIM2P49643 509 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 PSMD4P55036 377 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 PER3P56645 1201 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 HSF1Q00613 529 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 FOXO1Q12778 655 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 C4orf17Q53FE4 359 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 CMPK2Q5EBM0 449 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 OR4F3Q6IEY1 312 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 TMEM251Q8N6I4 163 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 VPS37AQ8NEZ2 397 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 OR56A1Q8NGH5 318 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 OR52N2Q8NGI0 321 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 GPR151Q8TDV0 419 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 ACTRT2Q8TDY3 377 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC9A6Q92581 669 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 HGDQ93099 445 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 EFHD2Q96C19 240 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 FAM120BQ96EK7 910 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC35A4Q96G79 324 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 MAGEB18Q96M61 343 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 ANGPTL4Q9BY76 406 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 SLCO1B3Q9NPD5 702 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 ZNF446Q9NWS9 450 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 SH3BGRL2Q9UJC5 107 aa16.95■□□□□ 0.3
PRPF40B-216ENST00000552301 UBR5O95071 2799 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 E9PBE3 544 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 KCNH1O95259 989 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 STSP08842 583 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 IDO1P14902 403 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 S100A3P33764 101 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 MAGEA5P43359 124 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 CCT3P49368 545 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 PNLIPRP2P54317 469 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 NME5P56597 212 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 TP53BP2Q13625 1128 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms