RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 BTKQ06187 659 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 C2orf80Q0P641 193 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 NNATQ16517 81 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 CYP27C1Q4G0S4 372 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 EIPR1Q53HC9 387 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 SEM1Q6ZVN7 128 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 IKBIPQ70UQ0 350 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 TDRPQ86YL5 185 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 PLCZ1Q86YW0 608 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MMP21Q8N119 569 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 OR9A2Q8NGT5 310 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 OR14L1PQ8NHC6 308 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MBD3L2Q8NHZ7 208 aaPredicted RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MZB1Q8WU39 189 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM222BQ8WU58 562 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 NINJ1Q92982 152 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 TMBIM1Q969X1 311 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 ADOQ96SZ5 270 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 TM9SF2Q99805 663 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 OR2B2Q9GZK3 357 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 GSTO2Q9H4Y5 243 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 SDHAF3Q9NRP4 125 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 SLC6A5Q9Y345 797 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 OR10H1Q9Y4A9 318 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 POLQO75417 2590 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 PHF3Q92576 2039 aaKnown RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 MYO1GB0I1T2 1018 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 G3V2L1 256 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 LINC01387J3KSC0 135 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 PLOD2O00469 737 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 GOSR1O95249 250 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM153BP0C7A2 387 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 CT45A8P0DMV1 189 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 CT45A9P0DMV2 189 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 UROSP10746 265 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 CPA3P15088 417 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 DDX5P17844 614 aaKnown RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 POU3F2P20265 443 aaPredicted RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 NTSP30990 170 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 SOX18P35713 384 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 PTGDSP41222 190 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 CLK3P49761 638 aaKnown RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 NCBP2P52298 156 aaKnown RBP eCLIP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 NAGLUP54802 743 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 DLX5P56178 289 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 DUSP2Q05923 314 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 GAB1Q13480 694 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 TESK1Q15569 626 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 ZNHIT3Q15649 155 aaPredicted RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 LTB4RQ15722 352 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM153CQ494X1 144 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 CT45A2Q5DJT8 189 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 SH2D5Q6ZV89 423 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 LARP4Q71RC2 724 aaKnown RBP eCLIP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 IFNEQ86WN2 208 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 WDSUB1Q8N9V3 476 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 TNIP2Q8NFZ5 429 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 KAT2AQ92830 837 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 WNT2BQ93097 391 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 UCN2Q96RP3 112 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 TRIB1Q96RU8 372 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 TRMOQ9BU70 441 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 FOLH1BQ9HBA9 442 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 C3orf14Q9HBI5 128 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 MYNNQ9NPC7 610 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 OXSMQ9NWU1 459 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 TAS2R10Q9NYW0 307 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 C19orf53Q9UNZ5 99 aaPredicted RBP9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 WIF1Q9Y5W5 379 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
VTI1BP3-201ENST00000550220 FBN2P35556 2912 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 A0A1W2PPM1 405 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 NPIPB8E9PQR5 432 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 H0Y3Z8 333 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SLC28A1O00337 649 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 UBFD1O14562 309 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 COPEO14579 308 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 RGS14O43566 566 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 TSPAN2O60636 221 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 PLIN3O60664 434 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 CTAG2O75638 210 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 CHEK2O96017 543 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 PROCP04070 461 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 PRPH2P23942 346 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 HTR6P50406 440 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 EEFSECP57772 596 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SORDQ00796 357 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 DAZAP2Q15038 168 aaPredicted RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 BCL2A1Q16548 175 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 DECR1Q16698 335 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 LIPMQ5VYY2 423 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM71E1Q6IPT2 247 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM180BQ6P0A1 224 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 FRMD7Q6ZUT3 714 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 CHMP1BQ7LBR1 199 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 YRDCQ86U90 279 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SLC44A2Q8IWA5 706 aaPredicted RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 TRIM42Q8IWZ5 723 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms