RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TLX1P31314 330 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 MAN2A2P49641 1150 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 CLDN8P56748 225 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 CBX1P83916 185 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 ZNF267Q14586 743 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 PDCD4Q53EL6 469 aaKnown RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 TRILQ7L0X0 811 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 SLC29A4Q7RTT9 530 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 NUBPLQ8TB37 319 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 RBM18Q96H35 190 aaKnown RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 ZNF764Q96H86 408 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 EGLN2Q96KS0 407 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 SGCZQ96LD1 299 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 TSSK3Q96PN8 268 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 TMEM45AQ9NWC5 275 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 ALKBH4Q9NXW9 302 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 HEY2Q9UBP5 337 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 ACAD8Q9UKU7 415 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 PCDHA9Q9Y5H5 950 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.34□□□□□ -0.43
NUP188-211ENST00000550219 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 TBX19O60806 448 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 NADKO95544 446 aaPredicted RBP12.33□□□□□ -0.44
NUP188-211ENST00000550219 AIFM1O95831 613 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 IGHG3P01860 377 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 IGKV3-11P04433 115 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 IL3P08700 152 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 DRD2P14416 443 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 GPX3P22352 226 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 FOXO1Q12778 655 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 MYBPHQ13203 477 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 PDE7AQ13946 482 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 PTGR1Q14914 329 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 MPEG1Q2M385 716 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 WLSQ5T9L3 541 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 SLC22A10Q63ZE4 541 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 B3GNT6Q6ZMB0 384 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 TANKQ92844 425 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
NUP188-211ENST00000550219 MARK4Q96L34 752 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 FAIM2Q9BWQ8 316 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 MYLK2Q9H1R3 596 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 MRGBPQ9NV56 204 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.44
NUP188-211ENST00000550219 EHD3Q9NZN3 535 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 CES1P1Q9UKY3 287 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
NUP188-211ENST00000550219 MAPRE3Q9UPY8 281 aa12.33□□□□□ -0.44
NUP188-211ENST00000550219 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 OTOGQ6ZRI0 2925 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 PCNX1Q96RV3 2341 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 TRGV5A0A0B4J1U4 118 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 C1orf226A1L170 272 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 WASHC1A8K0Z3 465 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 AQP7O14520 342 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 CCDC22O60826 627 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 TOXO94900 526 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 DDCP20711 480 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 MSX1P28360 303 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 UFM1P61960 85 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 TFF3Q07654 80 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 C2orf80Q0P641 193 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 SQLEQ14534 574 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 HEPACAMQ14CZ8 416 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ZNF791Q3KP31 576 aaPredicted RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 C1orf185Q5T7R7 199 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 LYPD8Q6UX82 237 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 CAMKMTQ7Z624 323 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ST13P4Q8IZP2 240 aaPredicted RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 MMP21Q8N119 569 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 MIER2Q8N344 545 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 CLHC1Q8NHS4 586 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 RIT1Q92963 219 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 SARAFQ96BY9 339 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 MTERF3Q96E29 417 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 TEX37Q96LM6 180 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ZNF559Q9BR84 538 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 TTYH2Q9BSA4 534 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 NMUR2Q9GZQ4 415 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 WWTR1Q9GZV5 400 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms