RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CT45A9P0DMV2 189 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 IL12BP29460 328 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 CASP3P42574 277 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 MAN2A2P49641 1150 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ADORA2A-AS1P86434 159 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ZNF385BQ569K4 471 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 CT45A2Q5DJT8 189 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 C6orf136Q5SQH8 315 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 HHATQ5VTY9 493 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 NPSR1Q6W5P4 371 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ZNF551Q7Z340 670 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 MRGPRGQ86SM5 289 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 SLC44A2Q8IWA5 706 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 LIX1Q8N485 282 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ZNF781Q8N8C0 355 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ANKRD42Q8N9B4 389 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 FNDC5Q8NAU1 212 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 CIDECQ96AQ7 238 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 TUBGCP3Q96CW5 907 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 ELP4Q96EB1 424 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 TMEM41AQ96HV5 264 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 PAIP2Q9BPZ3 127 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 C1orf50Q9BV19 199 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 OSBPL11Q9BXB4 747 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 TP63Q9H3D4 680 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 KLRF1Q9NZS2 232 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 SH3BP4Q9P0V3 963 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 C15orf41Q9Y2V0 281 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 RAP2CQ9Y3L5 183 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 OR10H1Q9Y4A9 318 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 CELSR2Q9HCU4 2923 aa15.79■□□□□ 0.12
CHMP1A-208ENST00000550102 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 NPIPA2E9PIF3 369 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 NPIPA3F8WFD2 350 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 UPK1AO00322 258 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 SCAMP2O15127 329 aaKnown RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 NME6O75414 186 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 REM1O75628 298 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 BGNP21810 368 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 ELAVL4P26378 380 aaKnown RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 GPC1P35052 558 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 SLC1A6P48664 564 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 SNTA1Q13424 505 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 EFR3AQ14156 821 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 ZNHIT3Q15649 155 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 PDCD2Q16342 344 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 HIST2H2BCQ6DN03 193 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 SLC30A6Q6NXT4 461 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 SLC35A4Q96G79 324 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 DMRTA2Q96SC8 542 aa15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 ACSS1Q9NUB1 689 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-208ENST00000550102 ITPR2Q14571 2701 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 FIGNL2A6NMB9 653 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ADAM10O14672 748 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 PRPS2P11908 318 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 AGAP20933 346 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 FRKP42685 505 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 MRPS22P82650 360 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 MAD2L1Q13257 205 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 STX3Q13277 289 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ART3Q13508 389 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 PTGR1Q14914 329 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 FNDC7Q5VTL7 733 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 XKRXQ6PP77 449 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ANGPTL8Q6UXH0 198 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 LARP4Q71RC2 724 aaKnown RBP eCLIP15.77■□□□□ 0.125e-9■■■□□ 17.6
CHMP1A-208ENST00000550102 SARAFQ96BY9 339 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 NTNG2Q96CW9 530 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 TMCO6Q96DC7 493 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 NODALQ96S42 347 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ADOQ96SZ5 270 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 SLC6A15Q9H2J7 730 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ZNF395Q9H8N7 513 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ACKR4Q9NPB9 350 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 ATP6V1HQ9UI12 483 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 HAO1Q9UJM8 370 aa15.77■□□□□ 0.12
CHMP1A-208ENST00000550102 TSPAN2O60636 221 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 RPL14P50914 215 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 MANFP55145 182 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 MAGOHP61326 146 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 PSG6Q00889 435 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 CYP27C1Q4G0S4 372 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 EMC4Q5J8M3 183 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 WLSQ5T9L3 541 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 IL23RQ5VWK5 629 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 TIGD3Q6B0B8 471 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 DESI1Q6ICB0 168 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 NCCRP1Q6ZVX7 275 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 SZRD1Q7Z422 152 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 OR1J4Q8NGS1 313 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 NEIL3Q8TAT5 605 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 TLCD1Q96CP7 247 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 MS4A4EQ96PG1 132 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 SORT1Q99523 831 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 C20orf27Q9GZN8 174 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 UBQLN3Q9H347 655 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 TMBIM4Q9HC24 238 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 GALNT9Q9HCQ5 603 aa15.76■□□□□ 0.11
CHMP1A-208ENST00000550102 Q9N2J8 555 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms