RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 OR4F6Q8NGB9 312 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 OR52R1Q8NGF1 315 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 SLC44A1Q8WWI5 657 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 TM4SF18Q96CE8 201 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 KLHL29Q96CT2 875 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
PTCH1-218ENST00000548945 CNRIP1Q96F85 164 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-218ENST00000548945 SLC35A4Q96G79 324 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 ZNF681Q96N22 645 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 NSUN5Q96P11 429 aaKnown RBP11.67□□□□□ -0.54
PTCH1-218ENST00000548945 BTBD9Q96Q07 612 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 C1QTNF3Q9BXJ4 246 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 FUT8Q9BYC5 575 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 TAS2R10Q9NYW0 307 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 PACSIN3Q9UKS6 424 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 SNX6Q9UNH7 406 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 DLGAP4Q9Y2H0 992 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 WIF1Q9Y5W5 379 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 ZNF780BQ9Y6R6 833 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 HEATR5AQ86XA9 2040 aa11.67□□□□□ -0.54
PTCH1-218ENST00000548945 ATRQ13535 2644 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 PCNX3Q9H6A9 2034 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 FAM171A2A8MVW0 826 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 PLOD2O00469 737 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 MSTNO14793 375 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 CASKO14936 926 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 ARHGEF9O43307 516 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 HCRTR2O43614 444 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 PDYNP01213 254 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TUBBP07437 444 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 INHBBP09529 407 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 HSD3B1P14060 373 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 ZNF708P17019 499 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 HSD3B2P26439 372 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 SRYQ05066 204 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 LTBQ06643 244 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 EFR3AQ14156 821 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 OR2A2Q6IF42 318 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TAOK1Q7L7X3 1001 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 LUZP2Q86TE4 346 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 KRTAP1-3Q8IUG1 177 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 RELL1Q8IUW5 271 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 ADCY4Q8NFM4 1077 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 ZNF483Q8TF39 744 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-218ENST00000548945 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 SELENOMQ8WWX9 145 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TMBIM1Q969X1 311 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
PTCH1-218ENST00000548945 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 MRPL57Q9BQC6 102 aaKnown RBP11.66□□□□□ -0.54
PTCH1-218ENST00000548945 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 XPR1Q9UBH6 696 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TRPS1Q9UHF7 1281 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 EIF3LQ9Y262 564 aaKnown RBP11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TESMINQ9Y4I5 508 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
PTCH1-218ENST00000548945 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 A0A1W2PNV4 684 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 A0A1W2PPR1 153 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 TSPAN2O60636 221 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 REM1O75628 298 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 TNFSF13O75888 250 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 PCSK2P16519 638 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 ADSLP30566 484 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 SERPINB9P50453 376 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 CLDN18P56856 261 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 NKX6-1P78426 367 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 DUSP2Q05923 314 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 ZNF628Q5EBL2 1059 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 SGO1Q5FBB7 561 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 LETMD1Q6P1Q0 360 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 CXorf67Q86X51 503 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 GRAMD2AQ8IUY3 354 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 SIMC1Q8NDZ2 872 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 SFXN2Q96NB2 322 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 RHOXF2Q9BQY4 288 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 TSPYL1Q9H0U9 437 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 MRPL46Q9H2W6 279 aaKnown RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 FARSBQ9NSD9 589 aaKnown RBP11.65□□□□□ -0.54
PTCH1-218ENST00000548945 EHD3Q9NZN3 535 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 VPS29Q9UBQ0 182 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 UTS2RQ9UKP6 389 aa11.65□□□□□ -0.54
PTCH1-218ENST00000548945 DNHD1Q96M86 4753 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 A0A1B0GTL3 188 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 PLOD3O60568 738 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 INHBAP08476 426 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 CT45A8P0DMV1 189 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 CT45A9P0DMV2 189 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 KRT20P35900 424 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 ALDH9A1P49189 494 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 STARP49675 285 aa11.64□□□□□ -0.55
PTCH1-218ENST00000548945 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms