RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 HRH3Q9Y5N1 445 aa14.46□□□□□ -0.09
DDX54-205ENST00000548786 SCAMP2O15127 329 aaKnown RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 TRAPPC6AO75865 159 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 IL12BP29460 328 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 KRT20P35900 424 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 ASMTP46597 345 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 MAN2A2P49641 1150 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 PRKAG1P54619 331 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 MANFP55145 182 aaKnown RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 WDR4P57081 412 aaKnown RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 RPP38P78345 283 aaKnown RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 BST1Q10588 318 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 PDE7AQ13946 482 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 CASP8Q14790 479 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 ANGPTL8Q6UXH0 198 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 LARP4Q71RC2 724 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX54-205ENST00000548786 TRILQ7L0X0 811 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 PACS2Q86VP3 889 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 OR2L13Q8N349 312 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 RPRMLQ8N4K4 120 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 ELP4Q96EB1 424 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 COL21A1Q96P44 957 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 ANGPTL4Q9BY76 406 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 PNPLA3Q9NST1 481 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 PNPOQ9NVS9 261 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 SPRR3Q9UBC9 169 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 B4GALT7Q9UBV7 327 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 C19orf53Q9UNZ5 99 aaPredicted RBP14.45□□□□□ -0.1
DDX54-205ENST00000548786 MAPRE3Q9UPY8 281 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 RAP2CQ9Y3L5 183 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 CRYBG3Q68DQ2 2970 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 DNAJC13O75165 2243 aa14.45□□□□□ -0.1
DDX54-205ENST00000548786 A0A087WV62 115 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 TRGV5A0A0B4J1U4 118 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 PRAMEF25A6NGN4 478 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ADAM10O14672 748 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 TO15178 435 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 LAMP1P11279 417 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 GRK2P25098 689 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 RPL14P50914 215 aaKnown RBP14.44□□□□□ -0.1
DDX54-205ENST00000548786 HYAL4Q2M3T9 481 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 TBCELQ5QJ74 424 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 FNDC7Q5VTL7 733 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ZNF787Q6DD87 383 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ZNF585AQ6P3V2 769 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 MTFR2Q6P444 385 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 NUP54Q7Z3B4 507 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ZFP28Q8NHY6 868 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ZBED6CLQ96FA7 236 aaPredicted RBP14.44□□□□□ -0.1
DDX54-205ENST00000548786 OTUB1Q96FW1 271 aaPredicted RBP14.44□□□□□ -0.1
DDX54-205ENST00000548786 OSBPL11Q9BXB4 747 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 NUF2Q9BZD4 464 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 ALKBH4Q9NXW9 302 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 NKIRAS1Q9NYS0 192 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 MARCOQ9UEW3 520 aaPredicted RBP14.44□□□□□ -0.1
DDX54-205ENST00000548786 ACAD8Q9UKU7 415 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 PCNX1Q96RV3 2341 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 UNC79Q9P2D8 2635 aa14.44□□□□□ -0.1
DDX54-205ENST00000548786 NBPF19A0A087WUL8 3843 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 ANKRD33BA6NCL7 494 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 C17orf51A8MQB3 221 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 PRSS44E7EML9 344 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 PLOD2O00469 737 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 ICOSLGO75144 302 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 SNX4O95219 450 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 IGHG3P01860 377 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 G6PDP11413 515 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 NAGAP17050 411 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 ENDOUP21128 410 aaKnown RBP14.43□□□□□ -0.1
DDX54-205ENST00000548786 TCEA1P23193 301 aaKnown RBP14.43□□□□□ -0.1
DDX54-205ENST00000548786 PTGDSP41222 190 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 PSG6Q00889 435 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 CDSNQ15517 529 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 GXYLT1Q4G148 440 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 EMC4Q5J8M3 183 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 R3HCC1LQ7Z5L2 792 aaKnown RBP14.43□□□□□ -0.1
DDX54-205ENST00000548786 GALNT10Q86SR1 603 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 ARL8AQ96BM9 186 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 TLCD1Q96CP7 247 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 SECISBP2Q96T21 854 aaKnown RBP14.43□□□□□ -0.1
DDX54-205ENST00000548786 YIPF4Q9BSR8 244 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 AKTIPQ9H8T0 292 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 SERHLQ9NQF3 203 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 FLRT3Q9NZU0 649 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 EIF3LQ9Y262 564 aaKnown RBP14.43□□□□□ -0.1
DDX54-205ENST00000548786 C15orf41Q9Y2V0 281 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 SNX8Q9Y5X2 465 aa14.43□□□□□ -0.1
DDX54-205ENST00000548786 MAST4O15021 2626 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 C15orf38-AP3S2A0A0A6YYH1 394 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 GXYLT2A0PJZ3 443 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 OR6C70A6NIJ9 312 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 E9PLN8 166 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 SCO2O43819 266 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 TSPAN2O60636 221 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 SLITRK5O94991 958 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 PSMG1O95456 288 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 KITP10721 976 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 PRPS2P11908 318 aa14.42□□□□□ -0.1
DDX54-205ENST00000548786 CYP4B1P13584 511 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms