RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ACSM2BQ68CK6 577 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 ADGRE4PQ86SQ3 457 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 SLC22A9Q8IVM8 553 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 ZPLD1Q8TCW7 415 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 C16orf78Q8WTQ4 265 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 MZB1Q8WU39 189 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 COL21A1Q96P44 957 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 TUBA1CQ9BQE3 449 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 G6PC3Q9BUM1 346 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 CXXC4Q9H2H0 198 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 EPB41L4BQ9H329 900 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 LIME1Q9H400 295 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 JKAMPQ9P055 326 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 ST6GALNAC2Q9UJ37 374 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 TIMM22Q9Y584 194 aa15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 ZNF469Q96JG9 3925 aaPredicted RBP15.82■□□□□ 0.12
CHMP1A-205ENST00000548650 B4DXG7 233 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 EEF1E1-BLOC1S5C9J1V9 151 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 EEF1E1O43324 174 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 TSPAN2O60636 221 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 ABCB7O75027 752 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 ERN1O75460 977 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 CBR3O75828 277 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 BCAS2O75934 225 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 CYP4B1P13584 511 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 CPN1P15169 458 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 CTSSP25774 331 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 GCKP35557 465 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 AGFG1P52594 562 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 GFRA1P56159 465 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 RCAN2Q14206 197 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 HEPACAMQ14CZ8 416 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 ERCC6LQ2NKX8 1250 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 IFNEQ86WN2 208 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 SAMD14Q8IZD0 417 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 FAM9CQ8IZT9 166 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 OR7G2Q8NG99 324 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 OR14L1PQ8NHC6 308 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 RDH11Q8TC12 318 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 ACMSDQ8TDX5 336 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 TMCO6Q96DC7 493 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 RMND5BQ96G75 393 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 FOXC2Q99958 501 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 TXLNGYQ9BZA5 131 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 FOLH1BQ9HBA9 442 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 SLC35C2Q9NQQ7 365 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 SIRT5Q9NXA8 310 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 PSMC3IPQ9P2W1 217 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 FBXL2Q9UKC9 423 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 EMCNQ9ULC0 261 aa15.81■□□□□ 0.12
CHMP1A-205ENST00000548650 H0Y3Z8 333 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 UBFD1O14562 309 aaKnown RBP15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 PLOD3O60568 738 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 REM1O75628 298 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 IL18BPO95998 194 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 GSTA1P08263 222 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 FAM153BP0C7A2 387 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 TMIGD3P0DMS9 266 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 SRD5A2P31213 254 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 OPRM1P35372 400 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 GSTM5P46439 218 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 FOXA1P55317 472 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 PSPHP78330 225 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 SORDQ00796 357 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 FOXF2Q12947 444 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 FAM153CQ494X1 144 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 CDC20BQ86Y33 519 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 PLCZ1Q86YW0 608 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 ADOQ96SZ5 270 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 SHCBP1LQ9BZQ2 653 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 CCM2LQ9NUG4 571 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 GIMAP4Q9NUV9 329 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 CLCF1Q9UBD9 225 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 ACANP16112 2415 aa15.8■□□□□ 0.12
CHMP1A-205ENST00000548650 FLNAP21333 2647 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 SERTM1A2A2V5 107 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 C17orf51A8MQB3 221 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 G3V2L1 256 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 ANXA4P09525 319 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 PYGBP11216 843 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 DDCP20711 480 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 LHX2P50458 406 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 GAS1P54826 345 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 ZNF763Q0D2J5 394 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 EFR3AQ14156 821 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 SLC29A2Q14542 456 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 DAZAP2Q15038 168 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 PRSS53Q2L4Q9 553 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 SCIMPQ6UWF3 145 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 ENPP6Q6UWR7 440 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 PLXDC2Q6UX71 529 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 LARP4Q71RC2 724 aaKnown RBP eCLIP15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 TRIM42Q8IWZ5 723 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 IFT20Q8IY31 132 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 EFHD2Q96C19 240 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 UCN2Q96RP3 112 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 SFXN3Q9BWM7 321 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 MID1IP1Q9NPA3 183 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 TAS2R10Q9NYW0 307 aa15.79■□□□□ 0.12
CHMP1A-205ENST00000548650 SENP1Q9P0U3 644 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms