RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RNF4P78317 190 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 POU6F2P78424 691 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 CDK6Q00534 326 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 PSG6Q00889 435 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 CLN3Q13286 438 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 IL10RAQ13651 578 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 SCARB2Q14108 478 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 EBPQ15125 230 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 ADRM1Q16186 407 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 FXNQ16595 210 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 DUSP5Q16690 384 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 CYP27C1Q4G0S4 372 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 REEP3Q6NUK4 255 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 PTOV1Q86YD1 416 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 C10orf67Q8IYJ2 551 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 OR5D16Q8NGK9 328 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 THAP4Q8WY91 577 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 PMM1Q92871 262 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 RAB8BQ92930 207 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 UTP4Q969X6 686 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 HSPBAP1Q96EW2 488 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC35A4Q96G79 324 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 LCORQ96JN0 433 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 FER1L6-AS2Q96M78 137 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 TRNT1Q96Q11 434 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 ITPAQ9BY32 194 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 DEFB126Q9BYW3 111 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 WWTR1Q9GZV5 400 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 POLE3Q9NRF9 147 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 ACTR3BQ9P1U1 418 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 FBXL4Q9UKA2 621 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 PACSIN3Q9UKS6 424 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 GPR55Q9Y2T6 319 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 OR10H1Q9Y4A9 318 aa14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 MRPS18BQ9Y676 258 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-203ENST00000547063 TRBV11-1A0A0K0K1C0 115 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF891A8MT65 544 aaPredicted RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 A8MVJ9 347 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC28A2O43868 658 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 PDE9AO76083 593 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 IFNA14P01570 189 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 C1QCP02747 245 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 BCHEP06276 602 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 GUSBP08236 651 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 NUDT7P0C024 238 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 TFPTP0C1Z6 253 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 GGT1P19440 569 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 TRHRP34981 398 aaPredicted RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 PSMD4P55036 377 aaKnown RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 RRADP55042 308 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 NRG3P56975 720 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 FLOT2Q14254 428 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 ARHGAP11BQ3KRB8 267 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 MTX3Q5HYI7 312 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 C1orf146Q5VVC0 180 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 HEPHL1Q6MZM0 1159 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 DHFR2Q86XF0 187 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 KRT73Q86Y46 540 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC44A2Q8IWA5 706 aaPredicted RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 C9orf40Q8IXQ3 194 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 C10orf111Q8N326 155 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF321PQ8N8H1 164 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 FAM156AQ8NDB6 213 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 CHDHQ8NE62 594 aaPredicted RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 FBXO30Q8TB52 745 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 ELP5Q8TE02 316 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 SLC38A5Q8WUX1 472 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 CDS1Q92903 461 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 LRGUKQ96M69 825 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 GAL3ST4Q96RP7 486 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 G6PC3Q9BUM1 346 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 CACYBPQ9HB71 228 aaKnown RBP14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 ZNF160Q9HCG1 818 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 POMPQ9Y244 141 aa14.68□□□□□ -0.06
TRAFD1-203ENST00000547063 SPTBN2O15020 2390 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 SPTBN4Q9H254 2564 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 A0A0G2JPF8 293 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 HNRNPCL2B2RXH8 293 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 HNRNPCL3B7ZW38 293 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CXCR6O00574 342 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 TO15178 435 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 SERPINA7P05543 415 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 HNRNPCL4P0DMR1 293 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CT45A8P0DMV1 189 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CT45A9P0DMV2 189 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 ATP1A4Q13733 1029 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 DECR1Q16698 335 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 GPAT3Q53EU6 434 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 CT45A2Q5DJT8 189 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 DCST2Q5T1A1 773 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 GLYATQ6IB77 296 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 JMJD6Q6NYC1 403 aaPredicted RBP14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 LRRC74BQ6ZQY2 392 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 PATL1Q86TB9 770 aaKnown RBP14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 VASH2Q86V25 355 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 KBTBD2Q8IY47 623 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 TAGAPQ8N103 731 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 ZSCAN1Q8NBB4 408 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 OR52E4Q8NGH9 312 aa14.67□□□□□ -0.06
TRAFD1-203ENST00000547063 NFKBIDQ8NI38 313 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms