RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ELAVL4P26378 380 aaKnown RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 FRKP42685 505 aaPredicted RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 CORO7P57737 925 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 MRPS22P82650 360 aaKnown RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 MAD2L1Q13257 205 aaPredicted RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 ART3Q13508 389 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 EFR3AQ14156 821 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 MPP2Q14168 576 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 SMU1Q2TAY7 513 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 C6orf136Q5SQH8 315 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 CES4AQ5XG92 561 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 BICRALQ6AI39 1079 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 SLC30A6Q6NXT4 461 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 XKRXQ6PP77 449 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 NPSR1Q6W5P4 371 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 CLHC1Q8NHS4 586 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 TMBIM1Q969X1 311 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 SARAFQ96BY9 339 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 TMCO6Q96DC7 493 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 ELP4Q96EB1 424 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 C3orf30Q96M34 536 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 COL21A1Q96P44 957 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 OSBPL11Q9BXB4 747 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 LDAHQ9H6V9 325 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 ACSS1Q9NUB1 689 aaPredicted RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 BAIAP2L1Q9UHR4 511 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 HAO1Q9UJM8 370 aa14.56□□□□□ -0.08
DDX54-204ENST00000546898 KLF2Q9Y5W3 355 aaPredicted RBP14.56□□□□□ -0.08
DDX54-204ENST00000546898 CENPEQ02224 2701 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 PRAMEF25A6NGN4 478 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 NPIPA2E9PIF3 369 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 NPIPA3F8WFD2 350 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 UPK1AO00322 258 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 ADAM10O14672 748 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 SCAMP2O15127 329 aaKnown RBP14.55□□□□□ -0.08
DDX54-204ENST00000546898 ITM2AO43736 263 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 TSPAN2O60636 221 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 REM1O75628 298 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 GDF1P27539 372 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 IL12BP29460 328 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 GPC1P35052 558 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 SLC1A6P48664 564 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 SLC18A1P54219 525 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 PNLIPRP2P54317 469 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 PSG6Q00889 435 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 HSPB3Q12988 150 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 ZNHIT3Q15649 155 aaPredicted RBP14.55□□□□□ -0.08
DDX54-204ENST00000546898 ZNF385BQ569K4 471 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 HHATQ5VTY9 493 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 TMEM211Q6ICI0 200 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 ANKRD26P1Q6NSI1 321 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 LIX1Q8N485 282 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 ZNF781Q8N8C0 355 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 FNDC5Q8NAU1 212 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 TUBGCP3Q96CW5 907 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 NODALQ96S42 347 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 UBQLN3Q9H347 655 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 EXO5Q9H790 373 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 KLRF1Q9NZS2 232 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 SH3BP4Q9P0V3 963 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 GIMAP2Q9UG22 337 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 ATP6V1HQ9UI12 483 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 C15orf41Q9Y2V0 281 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 OR10H1Q9Y4A9 318 aa14.55□□□□□ -0.08
DDX54-204ENST00000546898 TMEM120BA0PK00 339 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 FIGNL2A6NMB9 653 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 SNPHO15079 494 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 HPNP05981 417 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 BGNP21810 368 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 MANFP55145 182 aaKnown RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 STX3Q13277 289 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 MLC1Q15049 377 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 CYP27C1Q4G0S4 372 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 EMC4Q5J8M3 183 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 FNDC7Q5VTL7 733 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 TIGD3Q6B0B8 471 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 ZNF551Q7Z340 670 aaPredicted RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 SLC44A2Q8IWA5 706 aaPredicted RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 NATD1Q8N6N6 113 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 OR1J4Q8NGS1 313 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 NEIL3Q8TAT5 605 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 CIDECQ96AQ7 238 aaPredicted RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 ADOQ96SZ5 270 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 SORT1Q99523 831 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 LMF2Q9BU23 707 aaKnown RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 C1orf50Q9BV19 199 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 C3orf14Q9HBI5 128 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 Q9N2J8 555 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 ATAD3AQ9NVI7 634 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 ASIC5Q9NY37 505 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
DDX54-204ENST00000546898 PCDHGB3Q9Y5G1 929 aa14.54□□□□□ -0.08
DDX54-204ENST00000546898 PRSS44E7EML9 344 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 WDR1O75083 606 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 ICOSLGO75144 302 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 NME6O75414 186 aaPredicted RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 ENDOUP21128 410 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 PTPN6P29350 595 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 PTGDSP41222 190 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms