RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 DCAF4L1Q3SXM0 396 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 IFI44LQ53G44 452 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 METTL11BQ5VVY1 283 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 NKAIN2Q5VXU1 208 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 CWC27Q6UX04 472 aaKnown RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 TFAP2EQ6VUC0 442 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 MOB1BQ7L9L4 216 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 SLC22A16Q86VW1 577 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 ZNF433Q8N7K0 673 aaPredicted RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 LINC01555Q8NAE3 123 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 LPCAT1Q8NF37 534 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 MRPL9Q9BYD2 267 aaKnown RBP2.47□□□□□ -2.01
CCDC38-204ENST00000546816 EHD1Q9H4M9 534 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 DCLRE1BQ9H816 532 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 NARFQ9UHQ1 456 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 ZNF221Q9UK13 617 aa2.47□□□□□ -2.01
CCDC38-204ENST00000546816 A0A0A6YYC8 382 aaPredicted RBP2.46□□□□□ -2.02
CCDC38-204ENST00000546816 I3L1I5 382 aaPredicted RBP2.46□□□□□ -2.02
CCDC38-204ENST00000546816 EI24O14681 340 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 LATO43561 262 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 BUB1O43683 1085 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 NME2P1O60361 137 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 RANBP6O60518 1105 aaKnown RBP2.46□□□□□ -2.02
CCDC38-204ENST00000546816 NOL4O94818 638 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 GSTA1P08263 222 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 PSG2P11465 335 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 ZNF18P17022 549 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 NSFP46459 744 aaKnown RBP2.46□□□□□ -2.02
CCDC38-204ENST00000546816 POU3F4P49335 361 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 LINC00315P59091 139 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 HERV-K104P63124 156 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 EBI3Q14213 229 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 RCN2Q14257 317 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 ZNF528Q3MIS6 628 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 TFDP3Q5H9I0 405 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 IL34Q6ZMJ4 242 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 C10orf53Q8N6V4 93 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 C5orf30Q96GV9 206 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 OSBPL8Q9BZF1 889 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 SLC5A7Q9GZV3 580 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 TSPY26PQ9H489 355 aa2.46□□□□□ -2.02
CCDC38-204ENST00000546816 ZCCHC3Q9NUD5 404 aaKnown RBP2.46□□□□□ -2.02
CCDC38-204ENST00000546816 TRBV7-9A0A0J9YWB2 115 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 TRIM49D1C9J1S8 452 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 NPIPA2E9PIF3 369 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 CFLARO15519 480 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 AKAP3O75969 853 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 CCNE1P24864 410 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 CTNNA1P35221 906 aaKnown RBP2.45□□□□□ -2.02
CCDC38-204ENST00000546816 SSTP61278 116 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 IL9RQ01113 521 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 AGBL2Q5U5Z8 902 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 ARMC3Q5W041 872 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 IYDQ6PHW0 289 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 PYROXD2Q8N2H3 581 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 CADM2Q8N3J6 435 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 P3H4Q92791 437 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 PTP4A1Q93096 173 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 IL22RA2Q969J5 263 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 ACCSQ96QU6 501 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 SCRT1Q9BWW7 348 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 Q9H3A6 140 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 RAB26Q9ULW5 256 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 ENTPD4Q9Y227 616 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 DHRS7Q9Y394 339 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 LTBP1Q14766 1721 aa2.45□□□□□ -2.02
CCDC38-204ENST00000546816 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 CA11O75493 328 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 TGDSO95455 350 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 ECDO95905 644 aaPredicted RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 MUTP22033 750 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 BNIP1Q12981 228 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 GPAT3Q53EU6 434 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 TMEM270Q6UE05 265 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 C9orf40Q8IXQ3 194 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 OR4A16Q8NH70 328 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 SLC25A39Q9BZJ4 359 aaPredicted RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 CCSER1Q9C0I3 900 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 MMADHCQ9H3L0 296 aaPredicted RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 FAM124BQ9H5Z6 455 aaPredicted RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 EXOSC3Q9NQT5 275 aaKnown RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 STARD5Q9NSY2 213 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 PIGVQ9NUD9 493 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 AKAP7Q9P0M2 348 aaPredicted RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 PURGQ9UJV8 347 aaKnown RBP2.44□□□□□ -2.02
CCDC38-204ENST00000546816 KLHDC2Q9Y2U9 406 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 SNX5Q9Y5X3 404 aa2.44□□□□□ -2.02
CCDC38-204ENST00000546816 ZNFX1Q9P2E3 1918 aaKnown RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 LRRK1Q38SD2 2015 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 C11orf98E9PRG8 122 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.43□□□□□ -2.02
CCDC38-204ENST00000546816 WWP2O00308 870 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 OR7A17O14581 309 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 FMO6PO60774 539 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 LRP3O75074 770 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 GMNNO75496 209 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 GHRP10912 638 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 NUMBP49757 651 aa2.43□□□□□ -2.02
CCDC38-204ENST00000546816 ARF5P84085 180 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms