RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 IRX1P78414 480 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 Q0VFX4 171 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 HSPB3Q12988 150 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 BIKQ13323 160 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 RCAN2Q14206 197 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 RPS6KA2Q15349 733 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PRSS53Q2L4Q9 553 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MPEG1Q2M385 716 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 TIGD2Q4W5G0 525 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF628Q5EBL2 1059 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 SPANXN4Q5MJ08 99 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 CPTPQ5TA50 214 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 IRAK1BP1Q5VVH5 260 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 BORAQ6PGQ7 559 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 DGAT2L6Q6ZPD8 337 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 APLFQ8IW19 511 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 KBTBD2Q8IY47 623 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 GLB1L3Q8NCI6 653 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 APCDD1LQ8NCL9 501 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MORN4Q8NDC4 146 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 NFAM1Q8NET5 270 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 B3GNT7Q8NFL0 401 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 OR8J2Q8NGG1 315 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 OR9I1Q8NGQ6 314 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF675Q8TD23 568 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PTPMT1Q8WUK0 201 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 APOBEC4Q8WW27 367 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 RIT1Q92963 219 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 NCLNQ969V3 563 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PPWD1Q96BP3 646 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 VMP1Q96GC9 406 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 RBM18Q96H35 190 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ART5Q96L15 291 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 TEX37Q96LM6 180 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 IMMP1LQ96LU5 166 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 AMDHD1Q96NU7 426 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 DUSP26Q9BV47 211 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ING2Q9H160 280 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 GLIPR2Q9H4G4 154 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 RABEP2Q9H5N1 569 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PRORYQ9H606 182 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF385DQ9H6B1 395 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 CXorf21Q9HAI6 301 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MMP25Q9NPA2 562 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ACSS1Q9NUB1 689 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 GPR83Q9NYM4 423 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MAT2BQ9NZL9 334 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 PPIEQ9UNP9 301 aaKnown RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ERVK-19Q9WJR5 959 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 NBASA2RRP1 2371 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 SVILO95425 2214 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GABRR3A8MPY1 467 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 NR5A2O00482 541 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 RNASET2O00584 256 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SNX3O60493 162 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 PRAMEF2O60811 474 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 COQ9O75208 318 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SLC22A3O75751 556 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 C6orf47O95873 294 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 CLPSP04118 112 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 IFI6P09912 130 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 CT62P0C5K7 136 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ITGAMP11215 1152 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ICAM2P13598 275 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ATF4P18848 351 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 TNNI3P19429 210 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 NCF2P19878 526 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GPX3P22352 226 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ITGA3P26006 1051 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 IL12AP29459 219 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 MPIP34949 423 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SOAT1P35610 550 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 CDK9P50750 372 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 CLCN2P51788 898 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 POLE2P56282 527 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 RAPSNQ13702 412 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF267Q14586 743 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 MYBPC3Q14896 1274 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 EXOSC7Q15024 291 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 EBPQ15125 230 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 TBR1Q16650 682 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 PRICKLE4Q2TBC4 344 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 PGS1Q32NB8 556 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 METTL21CQ5VZV1 264 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 HLA-DQA1Q5Y7H0 255 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 OR4F3Q6IEY1 312 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 C19orf48Q6RUI8 117 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 FAM111BQ6SJ93 734 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 TMEM107Q6UX40 140 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF551Q7Z340 670 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GPR155Q7Z3F1 870 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SZRD1Q7Z422 152 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 CPLX4Q7Z7G2 160 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms