RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ERVK13-1Q9NX77 482 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 TRAPPC13A5PLN9 417 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 MEN1O00255 615 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ATP6V1G1O75348 118 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 GCAP28676 217 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ALG10Q5BKT4 473 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 CGB2Q6NT52 195 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 RFLNAQ6ZTI6 216 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ZNF480Q8WV37 535 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SERINC2Q96SA4 455 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 TUBA1CQ9BQE3 449 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 FANCFQ9NPI8 374 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SLC7A7Q9UM01 511 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 CCL26Q9Y258 94 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 GABRR3A8MPY1 467 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 H3BML4 177 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 HMGN2P05204 90 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 ATXN1LP0C7T5 689 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 C7P10643 843 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 DCTP40126 519 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 Q8N402 240 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 TRMT2BQ96GJ1 504 aaKnown RBP12.13□□□□□ -0.47
CHD4-211ENST00000544484 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 RIMS3Q9UJD0 308 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 SCML1Q9UN30 329 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 TMEM14AQ9Y6G1 99 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
CHD4-211ENST00000544484 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 NARSO43776 548 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 FMO6PO60774 539 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 PRAMEF2O60811 474 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ADAP00813 363 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 RAB15P59190 212 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 SELENOWP63302 87 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 LCTLQ6UWM7 567 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SCML4Q8N228 414 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 DHRS4Q9BTZ2 278 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 NUFIP1Q9UHK0 495 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 RBBP9O75884 186 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 DDCP20711 480 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SGSHP51688 502 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 LRIF1Q5T3J3 769 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SLC5A7Q9GZV3 580 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SLC9B1P1A6NJY1 282 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 PCP4L1A6NKN8 68 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 UGDHO60701 494 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SFTPDP35247 375 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 GGT2P36268 569 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 MAGEA8P43361 318 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 POU3F4P49335 361 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SSX6Q7RTT6 188 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 IGFN1Q86VF2 1251 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 USP36Q9P275 1121 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 MYH9P35579 1960 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 C17orf105B2RV13 164 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SLC19A2O60779 497 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 PENKP01210 267 aaPredicted RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 P04436 131 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 CST5P28325 142 aaPredicted RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 ZNF45Q02386 682 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 BTBD16Q32M84 506 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 TMPPEQ6ZT21 453 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 MS4A4EQ96PG1 132 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ATOH8Q96SQ7 321 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 BTNL2Q9UIR0 455 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ALG5Q9Y673 324 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 MROH6A6NGR9 719 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 GSTT2P0CG29 244 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 DPP6P42658 865 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 TSPYL5Q86VY4 417 aaPredicted RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 GOLM1Q8NBJ4 401 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
CHD4-211ENST00000544484 RPH3AQ9Y2J0 694 aaPredicted RBP12.12□□□□□ -0.47
CHD4-211ENST00000544484 MYH7BA7E2Y1 1941 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 BMP2P12643 396 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 FRKP42685 505 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 CTBSQ01459 385 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 CDCA3Q99618 268 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 ZNF350Q9GZX5 532 aa12.11□□□□□ -0.47
CHD4-211ENST00000544484 CUEDC1Q9NWM3 386 aaPredicted RBP12.11□□□□□ -0.47
CHD4-211ENST00000544484 CSNK1G3Q9Y6M4 447 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms