RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 UBL7Q96S82 380 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PAIP1Q9H074 479 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RNF32Q9H0A6 362 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC25A18Q9H1K4 315 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 IL1RL2Q9HB29 575 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLAMF8Q9P0V8 285 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LRFN1Q9P244 771 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NPFFR2Q9Y5X5 522 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZZEF1O43149 2961 aa13.37□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FBP2O00757 339 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 COX4I1P13073 169 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ABCD3P28288 659 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRHRP34981 398 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PSPHP78330 225 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CBX1P83916 185 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR1C1Q15619 314 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DUSP5Q16690 384 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LRIF1Q5T3J3 769 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 REP15Q6BDI9 236 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TNFAIP8L2Q6P589 184 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PKD1L2Q7Z442 2459 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DHDDSQ86SQ9 333 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TREML1Q86YW5 311 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GPALPP1Q8IXQ4 340 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HORMAD2Q8N7B1 307 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 COX18Q8N8Q8 333 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR5M3Q8NGP4 307 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PIK3R3Q92569 461 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TMBIM1Q969X1 311 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CMTM5Q96DZ9 223 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OMA1Q96E52 524 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 WBP1Q96G27 269 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 AURKBQ96GD4 344 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR51I1Q9H343 314 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TPT1P8Q9HAU6 139 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MRTO4Q9UKD2 239 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CBLCQ9ULV8 474 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CSAG2Q9Y5P2 127 aa13.36□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DUXAA6NLW8 204 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CDK2AP1O14519 115 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MRASO14807 208 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TO15178 435 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 REM1O75628 298 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NKX2-2O95096 273 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PTPN6P29350 595 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 IL12BP29460 328 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RFX3P48380 749 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CD97P48960 835 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KHKP50053 298 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ANXA11P50995 505 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DECR1Q16698 335 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CYP27C1Q4G0S4 372 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SPINK14Q6IE38 97 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DND1Q8IYX4 353 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DPP10Q8N608 796 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FAM13CQ8NE31 585 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CATSPER1Q8NEC5 780 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR5D16Q8NGK9 328 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CDS1Q92903 461 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TMEM125Q96AQ2 219 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SPACA9Q96E40 222 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RMND5BQ96G75 393 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SIGLEC12Q96PQ1 595 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR7D2Q96RA2 312 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 STACQ99469 402 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PIGUQ9H490 435 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RYDENQ9NUL5 291 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 VAPAQ9P0L0 249 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PCDHGB3Q9Y5G1 929 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 EXPH5Q8NEV8 1989 aa13.35□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GXYLT2A0PJZ3 443 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CLIC1O00299 241 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PPM1BO75688 479 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SOX30O94993 753 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 C1QCP02747 245 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FBXO45P0C2W1 286 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MAP3K8P41279 467 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CRATP43155 626 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TNFSF10P50591 281 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FBXW4P57775 412 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 POU6F2P78424 691 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 COQ5Q5HYK3 327 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.274e-6■■■□□ 16.5
TNFRSF1A-216ENST00000543995 LYPD8Q6UX82 237 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DLEU7Q6UYE1 221 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HOXB13Q92826 284 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 EFHD2Q96C19 240 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms