RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GPR78Q96P69 363 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 DPEP2Q9H4A9 486 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 CNIH4Q9P003 139 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 USP3Q9Y6I4 520 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF878C9JN71 531 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ICMTO60725 284 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 SULT1C4O75897 302 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 SCGB1D2O95969 90 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 AK4P27144 223 aaPredicted RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 FGL1Q08830 312 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 OR4K14Q8NGD5 310 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 CTRCQ99895 268 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 SYT4Q9H2B2 425 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 GRHPRQ9UBQ7 328 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 MROH6A6NGR9 719 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 WASHC1A8K0Z3 465 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 RBMXL2O75526 392 aaKnown RBP18.36■□□□□ 0.53
SUDS3-204ENST00000543473 NUDT7P0C024 238 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 GNSP15586 552 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 SLAMF1Q13291 335 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 C1orf189Q5VU69 101 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 TMEM107Q6UX40 140 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 ENTHD1Q8IYW4 607 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 ALG8Q9BVK2 526 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 ATG5Q9H1Y0 275 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 TUBB1Q9H4B7 451 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 OR6C74A6NCV1 312 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 TACR1P25103 407 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 NDUFS1P28331 727 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 SPINT3P49223 89 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 MANEALQ5VSG8 457 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 OR2AJ1Q8NGZ0 328 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 M0QZQ0 153 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 KMOO15229 486 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 CD3GP09693 182 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 CDKN2CP42773 168 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 PRKXP51817 358 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 TAP2Q03519 686 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF527Q8NB42 609 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 SETD7Q8WTS6 366 aaKnown RBP18.36■□□□□ 0.53
SUDS3-204ENST00000543473 THAP4Q8WY91 577 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF689Q96CS4 500 aaPredicted RBP18.36■□□□□ 0.53
SUDS3-204ENST00000543473 BRF2Q9HAW0 419 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 PCDHB16Q9NRJ7 776 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 RBFOX1Q9NWB1 397 aaKnown RBP18.36■□□□□ 0.53
SUDS3-204ENST00000543473 TAS2R16Q9NYV7 291 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 C5AR2Q9P296 337 aa18.36■□□□□ 0.53
SUDS3-204ENST00000543473 MSL3P1P0C860 447 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 GIFP27352 417 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 RAB30Q15771 203 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 C3P1Q6ZMU1 363 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 C3orf58Q8NDZ4 430 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 CD300LFQ8TDQ1 290 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 MAFIPQ8WZ33 124 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 SMIM14Q96QK8 99 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 AMBRA1Q9C0C7 1298 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 PADI2Q9Y2J8 665 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 BACE2Q9Y5Z0 518 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 CSNK1G3Q9Y6M4 447 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 A0A0G2JMP0 313 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 PRAF2O60831 178 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 SPDEFO95238 335 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 RHOP08100 348 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 GP2P55259 537 aaKnown RBP18.35■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF584Q8IVC4 421 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 OR4M2Q8NGB6 313 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 OR2A25A4D2G3 310 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 RAB41Q5JT25 222 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 NRROSQ86YC3 692 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 PNLDC1Q8NA58 520 aaKnown RBP18.35■□□□□ 0.53
SUDS3-204ENST00000543473 OR4E2Q8NGC2 313 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 SPRYD4Q8WW59 207 aaPredicted RBP18.35■□□□□ 0.53
SUDS3-204ENST00000543473 B8ZZF3 427 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 VNN2O95498 520 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 ASGR2P07307 311 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 DRD2P14416 443 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 PTH2RP49190 550 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 FAPQ12884 760 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 INAVAQ3KP66 663 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 CRTC1Q6UUV9 634 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 PAQR9Q6ZVX9 377 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 BEST4Q8NFU0 473 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 POT1Q9NUX5 634 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 TAS2R8Q9NYW2 309 aa18.35■□□□□ 0.53
SUDS3-204ENST00000543473 RORAP35398 523 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 CAV3P56539 151 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 SLC35A2P78381 396 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 CTSL3PQ5NE16 218 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 PDLIM5Q96HC4 596 aaKnown RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 SAMD8Q96LT4 415 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 OR5M11Q96RB7 305 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF436Q9C0F3 470 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 TEX13DA0A0J9YY54 714 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-204ENST00000543473 SC5DO75845 299 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 FAM189A2Q15884 450 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 LEXMQ3ZCV2 418 aa18.34■□□□□ 0.53
SUDS3-204ENST00000543473 UBE2FQ969M7 185 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms