RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C6P13671 934 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 RAB28P51157 221 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 CCINQ13939 588 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 GRM2Q14416 872 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 COMMD7Q86VX2 200 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 HOXB13Q92826 284 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 SLC25A44Q96H78 314 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 A0A1W2PP55 124 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 GRPRP30550 384 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 APCDD1Q8J025 514 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 HIF3AQ9Y2N7 669 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 NUBP2Q9Y5Y2 271 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 LTBP3Q9NS15 1303 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 RNGTTO60942 597 aaKnown RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 SC5DO75845 299 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 TUBG1P23258 451 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 FOXA1P55317 472 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 METTL27Q8N6F8 245 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 IQCF1Q8N6M8 205 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 FIBINQ8TAL6 211 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 HOXD1Q9GZZ0 328 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 IL21RQ9HBE5 538 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 PDE7BQ9NP56 450 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 A0A0G2JMP0 313 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 E2F3O00716 465 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 PRAF2O60831 178 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 DIRAS3O95661 229 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 LEG1Q6P5S2 330 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 WDR53Q7Z5U6 358 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 OR4M2Q8NGB6 313 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 OR5AK2Q8NH90 309 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 UTP4Q969X6 686 aaKnown RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 PPP4R1LQ9P1A2 415 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 B3GNT3Q9Y2A9 372 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 SPO11Q9Y5K1 396 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 EEF1E1-BLOC1S5C9J1V9 151 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 IL33O95760 270 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 SLC16A8O95907 504 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 AMY2AP04746 511 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 TNFRSF1BP20333 461 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 PTH2RP49190 550 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 RNF144AP50876 292 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 NKX3-2P78367 333 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 ARL6IP1Q15041 203 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 NDUFAF5Q5TEU4 345 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 CNIH2Q6PI25 160 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 MAMDC2Q7Z304 686 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 OR2T35Q8NGX2 323 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 TREX2Q9BQ50 279 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 PAAF1Q9BRP4 392 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 ZBTB20Q9HC78 741 aaPredicted RBP12.45□□□□□ -0.42
TNC-212ENST00000542877 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 IL17CQ9P0M4 197 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 SNRPD2P62316 118 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 PXKQ7Z7A4 578 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 NOXA1Q86UR1 476 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 TOR1AIP2Q8NFQ8 470 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 METTL2AQ96IZ6 378 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 TEPSINQ96N21 525 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 PHRF1Q9P1Y6 1649 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 A0A1W2PQU0 124 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 ZNF850A8MQ14 1090 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 PTGESO14684 152 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 LSSP48449 732 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 RIN1Q13671 783 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 ZDHHC1Q8WTX9 485 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 ALG8Q9BVK2 526 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 ZFP57Q9NU63 452 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 EMCNQ9ULC0 261 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 MYH11P35749 1972 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 SYNGR4O95473 234 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 RORAP35398 523 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 PIWIL3Q7Z3Z3 882 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 ARHGAP12Q8IWW6 846 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 OR7G3Q8NG95 312 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 SAMD8Q96LT4 415 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 SLC6A16Q9GZN6 736 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 LDAHQ9H6V9 325 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 UNKLQ9H9P5 680 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 ZNF226Q9NYT6 803 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms