RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NMT1P30419 496 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 OR3A1P47881 315 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 BCAP31P51572 246 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PSMD4P55036 377 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 MAZP56270 477 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 B3GALT5-AS1P59052 145 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ERVK11-1P61568 191 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RPL10AP62906 217 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 CCZ1BP86790 482 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 CCZ1P86791 482 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 GALK2Q01415 458 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ZNF415Q09FC8 603 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RASGEF1BQ0VAM2 473 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 LCP2Q13094 533 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RAPSNQ13702 412 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PDE7AQ13946 482 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ITIH4Q14624 930 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RFTN1Q14699 578 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 HERC3Q15034 1050 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TEAD2Q15562 447 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TEX30Q5JUR7 227 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TCHHL1Q5QJ38 904 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 SAPCD1Q5SSQ6 148 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 THEM4Q5T1C6 240 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PTRHD1Q6GMV3 140 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 CENPPQ6IPU0 288 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RWDD4Q6NW29 188 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 FUT10Q6P4F1 479 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 LRRC8BQ6P9F7 803 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 B3GLCTQ6Y288 498 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 CTAGE6Q86UF2 777 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RTN4RL2Q86UN3 420 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PIGZQ86VD9 579 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 LRRC6Q86X45 466 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TMEM126BQ8IUX1 230 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 CDKL3Q8IVW4 592 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 ELMOD2Q8IZ81 293 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 IQCKQ8N0W5 287 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TTC5Q8N0Z6 440 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PYROXD2Q8N2H3 581 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RAB42Q8N4Z0 105 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 CSGALNACT2Q8N6G5 542 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ZBTB44Q8NCP5 570 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 CCNYQ8ND76 341 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 OR52E1Q8NGJ3 308 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 OR13C3Q8NGS6 347 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 GRPEL2Q8TAA5 225 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 MRGPRDQ8TDS7 321 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 SETD7Q8WTS6 366 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 NAT14Q8WUY8 206 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 HPSE2Q8WWQ2 592 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 DNAJC9Q8WXX5 260 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 PIGBQ92521 554 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 TSACCQ96A04 125 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 SLC25A36Q96CQ1 311 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 LRRC39Q96DD0 335 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 C14orf79Q96F83 325 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 DTD2Q96FN9 168 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 NSMCE2Q96MF7 247 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 BIRC8Q96P09 236 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 XPO6Q96QU8 1125 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 TESK2Q96S53 571 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 MAP3K3Q99759 626 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ASCL2Q99929 193 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 BCL7BQ9BQE9 202 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 NTMT1Q9BV86 223 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ACPTQ9BZG2 426 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 GPR61Q9BZJ8 451 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 DDX47Q9H0S4 455 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 SDCBP2Q9H190 292 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 ATP13A3Q9H7F0 1226 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 MRPS30Q9NP92 439 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 CHST11Q9NPF2 352 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 MRPL17Q9NRX2 175 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 FAM207AQ9NSI2 230 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 ZCCHC3Q9NUD5 404 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 DDX28Q9NUL7 540 aaKnown RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 NYAP2Q9P242 653 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 SPASTQ9UBP0 616 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 STUB1Q9UNE7 303 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 FOXA2Q9Y261 457 aaPredicted RBP2.86□□□□□ -1.95
USP28-210ENST00000542033 CLCA3PQ9Y6N3 262 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 DNMBPQ6XZF7 1577 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 SMARCA4P51532 1647 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 RTL9Q8NET4 1388 aa2.86□□□□□ -1.95
USP28-210ENST00000542033 YTHDC2Q9H6S0 1430 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 MRC2Q9UBG0 1479 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 NRXN1Q9ULB1 1477 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 EFCAB5A4FU69 1503 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 CDK13Q14004 1512 aaKnown RBP2.85□□□□□ -1.95
USP28-210ENST00000542033 TRAV18A0A075B6X5 111 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 A0A087WW49 117 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TMEM129A0AVI4 362 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 ARHGEF35A5YM69 484 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 TMEM210A6NLX4 147 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 C17orf105B2RV13 164 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 GPR89AB7ZAQ6 455 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 H0YIG0 161 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 K7EPI3 171 aa2.85□□□□□ -1.95
USP28-210ENST00000542033 PSMD11O00231 422 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms