RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GOLGA8QA0A0J9YX86 632 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 A0A1W2PRB8 838 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 GXYLT2A0PJZ3 443 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 GOLGA8OA6NCC3 632 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 CYSRT1A8MQ03 144 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 GOLGA8NF8WBI6 632 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 TP53I11O14683 189 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 KLF11O14901 512 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 CDC40O60508 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
YBX3-212ENST00000542002 SCN2BO60939 215 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 ICOSLGO75144 302 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 REM1O75628 298 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 IGKV1D-16P01601 117 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 C1QCP02747 245 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 PRPS1L1P21108 318 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 MAPK1P28482 360 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 EPHA3P29320 983 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 CA7P43166 264 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 PRKAG1P54619 331 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 GAS1P54826 345 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 KCNJ2P63252 427 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 PLGLB1Q02325 96 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 PLCXD2Q0VAA5 305 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 MLC1Q15049 377 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 SMU1Q2TAY7 513 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 SLC9B1Q4ZJI4 515 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 EXOSC6Q5RKV6 272 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 ATG16L1Q676U5 607 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 C3P1Q6ZMU1 363 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 BNC2Q6ZN30 1099 aaPredicted RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 NCCRP1Q6ZVX7 275 aaPredicted RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 NUP54Q7Z3B4 507 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 R3HCC1LQ7Z5L2 792 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 SLC34A3Q8N130 599 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 GHDCQ8N2G8 530 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 WDSUB1Q8N9V3 476 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 NUP43Q8NFH3 380 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 RAB3IL1Q8TBN0 382 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 SSC4DQ8WTU2 575 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 PIK3R3Q92569 461 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 EFHD2Q96C19 240 aaPredicted RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 ZBED6CLQ96FA7 236 aaPredicted RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 SLC35A4Q96G79 324 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 JSRP1Q96MG2 331 aaPredicted RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 SECISBP2Q96T21 854 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 LMF2Q9BU23 707 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 DOHHQ9BU89 302 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 RTN4RQ9BZR6 473 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 CXorf36Q9H7Y0 433 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 SLCO1B3Q9NPD5 702 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 EQTNQ9NQ60 294 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 DDX18Q9NVP1 670 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 NOP53Q9NZM5 478 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 SH3BGRL2Q9UJC5 107 aa8.91□□□□□ -0.98
YBX3-212ENST00000542002 UTP20O75691 2785 aaKnown RBP8.91□□□□□ -0.98
YBX3-212ENST00000542002 USP9XQ93008 2570 aaPredicted RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 A0A1B0GVC2 190 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 OR6C70A6NIJ9 312 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CAPN14A8MX76 684 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 C9JVG2 144 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 HDAC3O15379 428 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 ZG16O60844 167 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 SLITRK5O94991 958 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CLDN1O95832 211 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 C6orf47O95873 294 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 IGHG3P01860 377 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 IFI6P09912 130 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 LBPP18428 481 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 IL12AP29459 219 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 GABRA3P34903 492 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 HPCAL1P37235 193 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 NME5P56597 212 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 UFM1P61960 85 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 HBA1P69905 142 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 ZNF155Q12901 538 aaPredicted RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 SLC10A1Q14973 349 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CDSNQ15517 529 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 PGS1Q32NB8 556 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 TMEM198Q66K66 360 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 HIST2H2BCQ6DN03 193 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 OR4F3Q6IEY1 312 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 RGS9BPQ6ZS82 235 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 GK5Q6ZS86 529 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 TRILQ7L0X0 811 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CAMKMTQ7Z624 323 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 GALNT10Q86SR1 603 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 SLC22A16Q86VW1 577 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 CLEC4FQ8N1N0 589 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 FAM109AQ8N4B1 249 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 SLC16A11Q8NCK7 471 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 PSMA8Q8TAA3 256 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 RNF138Q8WVD3 245 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 OR5P2Q8WZ92 322 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 FAM120BQ96EK7 910 aaKnown RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 OTUB1Q96FW1 271 aaPredicted RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 MAELQ96JY0 434 aaKnown RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 COL21A1Q96P44 957 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms