RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 ZZZ3Q8IYH5 903 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 PM20D2Q8IYS1 436 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 CEP112Q8N8E3 955 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 C9orf106Q8NAJ2 232 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 EXOSC8Q96B26 276 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 COL21A1Q96P44 957 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 UCN2Q96RP3 112 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 ADOQ96SZ5 270 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 OSBPL11Q9BXB4 747 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 RTN4RQ9BZR6 473 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 C12orf65Q9H3J6 166 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 METTL7AQ9H8H3 244 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 CALHM2Q9HA72 323 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 TBK1Q9UHD2 729 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 FBXL2Q9UKC9 423 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 CAMK2AQ9UQM7 478 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 ABCA4P78363 2273 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 MTORP42345 2549 aa10.74□□□□□ -0.69
CLSTN3-211ENST00000541667 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 PRAMEF25A6NGN4 478 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 REM1O75628 298 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 BCAS2O75934 225 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 PSMG1O95456 288 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 ACTL6AO96019 429 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 KRT15P19012 456 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 DDCP20711 480 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 HMOX2P30519 316 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 KIR2DL3P43628 341 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 STARP49675 285 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 AGFG1P52594 562 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 IST1P53990 364 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 B3GALT5-AS1P59052 145 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 ACSM2AQ08AH3 577 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 MYBPHQ13203 477 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 DAZAP2Q15038 168 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 C6orf163Q5TEZ5 329 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 ACSM2BQ68CK6 577 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 PLCZ1Q86YW0 608 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 TRIM42Q8IWZ5 723 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 GSPT2Q8IYD1 628 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 KIF18AQ8NI77 898 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 TRIB1Q96RU8 372 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 RHOXF2Q9BQY4 288 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 EBPLQ9BY08 206 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 FOLH1BQ9HBA9 442 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 MID1IP1Q9NPA3 183 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 RASSF1Q9NS23 344 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 PSMC3IPQ9P2W1 217 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 MAPRE3Q9UPY8 281 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 MED12LQ86YW9 2145 aa10.73□□□□□ -0.69
CLSTN3-211ENST00000541667 SETD2Q9BYW2 2564 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 GNG14A0A1W2PPG7 69 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 KIF2AO00139 706 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 PLOD2O00469 737 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 DVL2O14641 736 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 FADS1O60427 444 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 PLIN3O60664 434 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 ERN1O75460 977 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 IL18BPO95998 194 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 IL2RAP01589 272 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 ANXA4P09525 319 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CTSSP25774 331 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 UQCRC1P31930 480 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CRHR1P34998 444 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 LHX2P50458 406 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 ASCL1P50553 236 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 PNLIPRP2P54317 469 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CLDN15P56746 228 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 DNAJB13P59910 316 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 C2orf80Q0P641 193 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 HEPACAMQ14CZ8 416 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 TOMM20Q15388 145 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 OR5M10Q6IEU7 315 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 FRMD7Q6ZUT3 714 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 SAMD14Q8IZD0 417 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CCNYL1Q8N7R7 359 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 EGLN2Q96KS0 407 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CXXC4Q9H2H0 198 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 GLIPR2Q9H4G4 154 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 DNAJB12Q9NXW2 375 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 FLRT3Q9NZU0 649 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 CBLCQ9ULV8 474 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 C19orf53Q9UNZ5 99 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 STK38LQ9Y2H1 464 aa10.72□□□□□ -0.69
CLSTN3-211ENST00000541667 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 A0A087WV62 115 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 UPK1AO00322 258 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 ABCB7O75027 752 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 RCBTB2O95199 551 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 ZWINTO95229 277 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 CYP4B1P13584 511 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 TACR1P25103 407 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 SRD5A2P31213 254 aa10.71□□□□□ -0.69
CLSTN3-211ENST00000541667 MPIP34949 423 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms