RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TMEM229AB2RXF0 380 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 M0QX08 132 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 OPN1SWP03999 348 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 ATP6AP1Q15904 470 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 GRAMD1BQ3KR37 738 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 CXorf21Q9HAI6 301 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 NECTIN3Q9NQS3 549 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 MKL2Q9ULH7 1088 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 KCNE3Q9Y6H6 103 aa25.86■■□□□ 1.73
CCM2-218ENST00000541586 C21orf140B9A014 251 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SUV39H1O43463 412 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 ASNA1O43681 348 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SLC28A2O43868 658 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 PGM3O95394 542 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 RAB40ALP0C0E4 278 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 HOXB6P17509 224 aaKnown RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 MAP4K2Q12851 820 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 ELOAQ14241 798 aaKnown RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 WDR53Q7Z5U6 358 aaPredicted RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 PATL1Q86TB9 770 aaKnown RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 GALNT12Q8IXK2 581 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 VWA5B2Q8N398 1253 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 METTL25Q8N6Q8 603 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SNIP1Q8TAD8 396 aaKnown RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 CENPNQ96H22 339 aaPredicted RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 TPD52L3Q96J77 140 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 DGAT2Q96PD7 388 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 GPR87Q9BY21 358 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SLC26A1Q9H2B4 701 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 ADAP2Q9NPF8 381 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 KCND3Q9UK17 655 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 MMACHCQ9Y4U1 282 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 IGLV3-12A0A075B6K2 115 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 VSTM2BA6NLU5 285 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 PEX1O43933 1283 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 KLF7O75840 302 aaPredicted RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 LDLRP01130 860 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 NR2F1P10589 423 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 LIFP15018 202 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 STT3AP46977 705 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SELENOWP63302 87 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 FUT5Q11128 374 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 EXOSC7Q15024 291 aaKnown RBP25.85■■□□□ 1.73
CCM2-218ENST00000541586 ANKFN1Q8N957 763 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 RIT1Q92963 219 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SPSB2Q99619 263 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 TGIF2Q9GZN2 237 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 TCFL5Q9UL49 500 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 PADI2Q9Y2J8 665 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 ZNF451Q9Y4E5 1061 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 LAMA5O15230 3695 aa25.85■■□□□ 1.73
CCM2-218ENST00000541586 SEMG1P04279 462 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 HEXBP07686 556 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 CD63P08962 238 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 SERTAD2Q14140 314 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 FAAH2Q6GMR7 532 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 CDC73Q6P1J9 531 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 FKBP9P1Q75LS8 142 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 SLC16A11Q8NCK7 471 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 ICA1LQ8NDH6 482 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 PTCHD1Q96NR3 888 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 DOHHQ9BU89 302 aa25.84■■□□□ 1.73
CCM2-218ENST00000541586 CLOCKO15516 846 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 CBX7O95931 251 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 IFNA14P01570 189 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 IZUMO2Q6UXV1 221 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 QSOX2Q6ZRP7 698 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 ADAMTS15Q8TE58 950 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 EME1Q96AY2 570 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 SLC35A4Q96G79 324 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 TREX2Q9BQ50 279 aaPredicted RBP25.83■■□□□ 1.73
CCM2-218ENST00000541586 CRB3Q9BUF7 120 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 WDR54Q9H977 334 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 C14orf105Q9NVL8 296 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 ZNF639Q9UID6 485 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 C3orf18Q9UK00 162 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 DTNAQ9Y4J8 743 aa25.83■■□□□ 1.73
CCM2-218ENST00000541586 DUXAA6NLW8 204 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 TERTO14746 1132 aaKnown RBP25.83■■□□□ 1.72
CCM2-218ENST00000541586 S1PR1P21453 382 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 FOLR3P41439 243 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 MAGEA2P43356 314 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 BIKQ13323 160 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 SLC9A6Q92581 669 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 RUBCNLQ9H714 662 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 IL1RAPQ9NPH3 570 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 NXT1Q9UKK6 140 aaKnown RBP25.83■■□□□ 1.72
CCM2-218ENST00000541586 C15orf41Q9Y2V0 281 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 RAXQ9Y2V3 346 aa25.83■■□□□ 1.72
CCM2-218ENST00000541586 IDSB3KWA1 339 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 DEAF1O75398 565 aaPredicted RBP25.82■■□□□ 1.72
CCM2-218ENST00000541586 CHRM4P08173 479 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 CRISP3P54108 245 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 EMP2P54851 167 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 KCNJ10P78508 379 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 SFT2D3Q587I9 215 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 ZDHHC21Q8IVQ6 265 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 CATSPER1Q8NEC5 780 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 OR2Y1Q8NGV0 311 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 CIB1Q99828 191 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms