RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 GLRA2P23416 452 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 DPP4P27487 766 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 AXLP30530 894 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 TSFMP43897 325 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 NPY2RP49146 381 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ARFIP1P53367 373 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 OR1D5P58170 312 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 OSTNP61366 133 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 BTG1P62324 171 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 HERVK_113P63132 956 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ERVK-8P63133 956 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LRRC74AQ0VAA2 488 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 RIPK1Q13546 671 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 HNRNPDQ14103 355 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 P2RY6Q15077 328 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 PDK4Q16654 411 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 CLPPQ16740 277 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 MTHFSDQ2M296 383 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 KIAA1644Q3SXP7 199 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 BLOC1S2Q6QNY1 142 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LEKR1Q6ZMV7 388 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 MTERF4Q7Z6M4 381 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LINC00518Q8N0U6 118 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 GCNT2Q8N0V5 402 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LSMEM2Q8N112 164 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 CENPSQ8N2Z9 138 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 DEFB123Q8N688 67 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 OR10G8Q8NGN5 311 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 CTNNBL1Q8WYA6 563 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 C10orf90Q96M02 699 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ANKRD27Q96NW4 1050 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 VPS35Q96QK1 796 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ERVK-6Q9BXR3 956 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 RMND5AQ9H871 391 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 POLD4Q9HCU8 107 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 SLC52A3Q9NQ40 469 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 C6orf203Q9P0P8 240 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LHX3Q9UBR4 397 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 LNPEPQ9UIQ6 1025 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 C2CD2Q9Y426 696 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 WIPI2Q9Y4P8 454 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 MAP3K15Q6ZN16 1313 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 MYO3BQ8WXR4 1341 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 DDX60Q8IY21 1712 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 SZT2Q5T011 3432 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 ARID2Q68CP9 1835 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 TRIM49BA6NDI0 452 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SIGLEC5O15389 551 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 ADAM12O43184 909 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 BUB1O43683 1085 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 TBX19O60806 448 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PALMO75781 387 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 GPIP06744 558 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 GSTT2P0CG29 244 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 GSTT2BP0CG30 244 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PAX1P15863 534 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 FCGR2BP31994 310 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 DLSTP36957 453 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 XGP55808 180 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SRYQ05066 204 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SRSF9Q13242 221 aaKnown RBP eCLIP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MSLNQ13421 630 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 NFATC2Q13469 925 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 RFTN1Q14699 578 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 EFTUD2Q15029 972 aaKnown RBP eCLIP3.66□□□□□ -1.825e-23■■■■■ 44.5
SNHG1-217ENST00000541578 P2RY14Q15391 338 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 TEAD2Q15562 447 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 TRIP10Q15642 601 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MRGPRG-AS1Q2M3A8 158 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SHROOM1Q2M3G4 852 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SGSM1Q2NKQ1 1148 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PARP6Q2NL67 630 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 POM121L1PQ3SYA9 428 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 ZNF311Q5JNZ3 666 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SLC35E4Q6ICL7 350 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PMF1Q6P1K2 205 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 Q6ZVQ6 151 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 CENPUQ71F23 418 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 SLC22A16Q86VW1 577 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 CACUL1Q86Y37 369 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PYROXD2Q8N2H3 581 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 WDR36Q8NI36 951 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 C8orf46Q8TAG6 207 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 MRPL24Q96A35 216 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 FAM122AQ96E09 287 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 HPDLQ96IR7 371 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PGLYRP2Q96PD5 576 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 CCT7Q99832 543 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 NDUFAF3Q9BU61 184 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 PAPOLGQ9BWT3 736 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 NLNQ9BYT8 704 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 POLR1EQ9GZS1 481 aaKnown RBP3.66□□□□□ -1.82
SNHG1-217ENST00000541578 EGLN1Q9GZT9 426 aa3.66□□□□□ -1.82
SNHG1-217ENST00000541578 RAB33BQ9H082 229 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms