RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 FRG2Q64ET8 278 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 CHMP1BQ7LBR1 199 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 PPM1NQ8N819 430 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 KCTD4Q8WVF5 259 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 CAVIN3Q969G5 261 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 PGM2Q96G03 612 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 SLC35A4Q96G79 324 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 FRG2BQ96QU4 278 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 REPIN1Q9BWE0 567 aaKnown RBP24.24■■□□□ 1.47
CHFR-218ENST00000540963 PLLPQ9Y342 182 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 CBX7O95931 251 aa24.23■■□□□ 1.47
CHFR-218ENST00000540963 MAPK12P53778 367 aa24.23■■□□□ 1.47
CHFR-218ENST00000540963 ZNF474Q6S9Z5 364 aaPredicted RBP24.23■■□□□ 1.47
CHFR-218ENST00000540963 METTL4Q8N3J2 472 aa24.23■■□□□ 1.47
CHFR-218ENST00000540963 NTMT1Q9BV86 223 aa24.23■■□□□ 1.47
CHFR-218ENST00000540963 FBXL2Q9UKC9 423 aa24.23■■□□□ 1.47
CHFR-218ENST00000540963 GPR55Q9Y2T6 319 aaPredicted RBP24.23■■□□□ 1.47
CHFR-218ENST00000540963 LRRC14BA6NHZ5 514 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 SLC22A20A6NK97 555 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 C16orf97H3BN30 126 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 ZIC3O60481 467 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 CNOT4O95628 575 aaKnown RBP24.22■■□□□ 1.47
CHFR-218ENST00000540963 PEPDP12955 493 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 POU2F1P14859 743 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 EMDP50402 254 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 ETF1P62495 437 aaKnown RBP24.22■■□□□ 1.47
CHFR-218ENST00000540963 GUCY2DQ02846 1103 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 EFR3AQ14156 821 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 VWA1Q6PCB0 445 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 SYT10Q6XYQ8 523 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 BTLAQ7Z6A9 289 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 CNEP1R1Q8N9A8 125 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 OR52R1Q8NGF1 315 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 FBXO25Q8TCJ0 367 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 RNF138Q8WVD3 245 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 IGFBPL1Q8WX77 278 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 EHD3Q9NZN3 535 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 DKKL1Q9UK85 242 aa24.22■■□□□ 1.47
CHFR-218ENST00000540963 CHD3Q12873 2000 aaKnown RBP24.22■■□□□ 1.47
CHFR-218ENST00000540963 EMC8O43402 210 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 BCAS2O75934 225 aaPredicted RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 CD8BP10966 210 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 CCKARP32238 428 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 STX2P32856 288 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 FEN1P39748 380 aaKnown RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 KIR2DL2P43627 348 aaPredicted RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 PTH2RP49190 550 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 PLTPP55058 493 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 EEFSECP57772 596 aaKnown RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 KLC3Q6P597 504 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 ADCY4Q8NFM4 1077 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 ANP32BQ92688 251 aaKnown RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 TMBIM1Q969X1 311 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 ERP27Q96DN0 273 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 BTBD9Q96Q07 612 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 MRPL1Q9BYD6 325 aaKnown RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 NOL11Q9H8H0 719 aaKnown RBP24.21■■□□□ 1.47
CHFR-218ENST00000540963 ADAM21Q9UKJ8 722 aa24.21■■□□□ 1.47
CHFR-218ENST00000540963 OR7A17O14581 309 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 ERAL1O75616 437 aaKnown RBP24.2■■□□□ 1.46
CHFR-218ENST00000540963 REM1O75628 298 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 C2P06681 752 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 DPP4P27487 766 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 LOXP28300 417 aaPredicted RBP24.2■■□□□ 1.46
CHFR-218ENST00000540963 PLEKHM3Q6ZWE6 761 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 ZNF572Q7Z3I7 529 aaPredicted RBP24.2■■□□□ 1.46
CHFR-218ENST00000540963 ATP6V1E2Q96A05 226 aa24.2■■□□□ 1.46
CHFR-218ENST00000540963 LINC01387J3KSC0 135 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 TSPAN2O60636 221 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 TNFRSF21O75509 655 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 KLHL2O95198 593 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 SIX3O95343 332 aaPredicted RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 CGAP01215 116 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 GRK2P25098 689 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 CASQ1P31415 396 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 CCNG1P51959 295 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 DSCR4P56555 118 aaPredicted RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 B3GALT5-AS1P59052 145 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 IRF9Q00978 393 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 IFT88Q13099 833 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 TRMT12Q53H54 448 aaKnown RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 TTC19Q6DKK2 380 aaPredicted RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 COMMD6Q7Z4G1 85 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 MEIOBQ8N635 442 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 ZNF675Q8TD23 568 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 ZNF845Q96IR2 970 aaPredicted RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 CDK15Q96Q40 435 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 HS3ST6Q96QI5 342 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 OPN3Q9H1Y3 402 aaPredicted RBP24.19■■□□□ 1.46
CHFR-218ENST00000540963 ZNF780BQ9Y6R6 833 aa24.19■■□□□ 1.46
CHFR-218ENST00000540963 ROS1P08922 2347 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 KRT20P35900 424 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 ARL1P40616 181 aaPredicted RBP24.18■■□□□ 1.46
CHFR-218ENST00000540963 PNLIPRP2P54317 469 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 OCRLQ01968 901 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 GGTA1PQ4G0N0 100 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 UBAP2Q5T6F2 1119 aaKnown RBP24.18■■□□□ 1.46
CHFR-218ENST00000540963 OR52B6Q8NGF0 335 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 KLHL29Q96CT2 875 aa24.18■■□□□ 1.46
CHFR-218ENST00000540963 ZNF681Q96N22 645 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms