RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 PLXDC2Q6UX71 529 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 MILR1Q7Z6M3 343 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 OR52B6Q8NGF0 335 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 TMBIM1Q969X1 311 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 PERPQ96FX8 193 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 G6PC3Q9BUM1 346 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 CES1P1Q9UKY3 287 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 SLC12A4Q9UP95 1085 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 WIF1Q9Y5W5 379 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 HCRTR2O43614 444 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 SMIM24O75264 130 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 ESRRBO95718 433 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 TGM6O95932 706 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 RBP1P09455 135 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 POU2F1P14859 743 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 CRYGSP22914 178 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 DPP4P27487 766 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 EMDP50402 254 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 CLDN18P56856 261 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 TRA2BP62995 288 aaKnown RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 FGFBP1Q14512 234 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 UAP1Q16222 522 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 TRMT12Q53H54 448 aaKnown RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 COMMD6Q7Z4G1 85 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 SAMD14Q8IZD0 417 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 CIARTQ8N365 385 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 TM4SF18Q96CE8 201 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 ADOQ96SZ5 270 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 VPS11Q9H270 941 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 SNX6Q9UNH7 406 aa11.3□□□□□ -0.6
COPS7A-211ENST00000540408 GPR55Q9Y2T6 319 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-211ENST00000540408 UQCRHLA0A096LP55 91 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 DEFB108AA8MXU0 73 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 C16orf97H3BN30 126 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 STX16-NPEPL1H3BU86 382 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 LINC01387J3KSC0 135 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 STX16O14662 325 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 RAD51CO43502 376 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 CBX7O95931 251 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 PCSK2P16519 638 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
COPS7A-211ENST00000540408 UGT2B10P36537 528 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 SERPINB8P50452 374 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 PNLIPRP2P54317 469 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 GGTA1PQ4G0N0 100 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 OR5M10Q6IEU7 315 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 UBQLNLQ8IYU4 475 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 CCDC116Q8IYX3 515 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 SELENOMQ8WWX9 145 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 ERP27Q96DN0 273 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 SLC35A4Q96G79 324 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 ZNF845Q96IR2 970 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-211ENST00000540408 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 SDHAF3Q9NRP4 125 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 PPP4R1LQ9P1A2 415 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 FBXL2Q9UKC9 423 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
COPS7A-211ENST00000540408 KIAA1324LA8MWY0 1029 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 EMC8O43402 210 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 ZIC3O60481 467 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 OTCP00480 354 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 GRK2P25098 689 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 PHBP35232 272 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 SIRPAP78324 504 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 MRPS35P82673 323 aaKnown RBP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 LTB4RQ15722 352 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 TECRLQ5HYJ1 363 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 LARP4Q71RC2 724 aaKnown RBP eCLIP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 BTLAQ7Z6A9 289 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 SPATA4Q8NEY3 305 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 OR4F6Q8NGB9 312 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 FBXO25Q8TCJ0 367 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 CNRIP1Q96F85 164 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 GPR78Q96P69 363 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 MDFIQ99750 246 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 GSX2Q9BZM3 304 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-211ENST00000540408 PTGES2Q9H7Z7 377 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 FANCFQ9NPI8 374 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 GIMAP4Q9NUV9 329 aa11.28□□□□□ -0.6
COPS7A-211ENST00000540408 TAS2R9Q9NYW1 312 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms