RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 SGK494L7N484 410 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 EEF1E1O43324 174 aaKnown RBP13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 TMPRSS11DO60235 418 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 RFPL3O75679 317 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 TIMP2P16035 220 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 OR10A3P58181 314 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC25A30Q5SVS4 291 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 AP2M1Q96CW1 435 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 SCLYQ96I15 445 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF649Q9BS31 505 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 MED28Q9H204 178 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 OR2AG1Q9H205 316 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 PCYT1BQ9Y5K3 369 aaPredicted RBP13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 KCNE3Q9Y6H6 103 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
SCNN1A-215ENST00000540037 I3L521 148 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 SHOXO15266 292 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 OLFM2O95897 454 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 CHRM4P08173 479 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 GNSP15586 552 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 NAT1P18440 290 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 TBXA2RP21731 343 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 PSMB5P28074 263 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 NUDT1P36639 197 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ADAM15Q13444 863 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF750Q32MQ0 723 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 OR9A1PQ8NGU1 263 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 TEX47Q8TBZ9 253 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 CREB3L1Q96BA8 519 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 SECISBP2Q96T21 854 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ELAC1Q9H777 363 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 B3GNT2Q9NY97 397 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 KIF26AQ9ULI4 1882 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 A0A1W2PRU2 124 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 CPSF4LA6NMK7 179 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 SOCS6O14544 535 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 PDGFAP04085 211 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ACP5P13686 325 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 TRIM23P36406 574 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 COX10Q12887 443 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 FGFBP1Q14512 234 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 NUMA1Q14980 2115 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 GPR135Q8IZ08 494 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 FBXL6Q8N531 539 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 WDR34Q96EX3 536 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 LHX9Q9NQ69 397 aa13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 ELF5Q9UKW6 265 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-215ENST00000540037 A0A1W2PS29 197 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 UBXN7O94888 489 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 PCBP4P57723 403 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 FUT5Q11128 374 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 PIP5KL1Q5T9C9 394 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 HTR3DQ70Z44 454 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 DPCDQ9BVM2 203 aaPredicted RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 DDX31Q9H8H2 851 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 HEXA-AS1Q9H8Q6 139 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 MRPL17Q9NRX2 175 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 MRPS18AQ9NVS2 196 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 SLC25A13Q9UJS0 675 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 FAM170BA6NMN3 283 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 B8ZZF3 427 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 HLA-DPB1P04440 258 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 SHC1P29353 583 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 BSGP35613 385 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 ATP6V1E1P36543 226 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 PNLIPRP1P54315 467 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 EPHB3P54753 998 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 ENTPD8Q5MY95 495 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 IDO2Q6ZQW0 420 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
SCNN1A-215ENST00000540037 SAMD12Q8N8I0 201 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms