RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 FNTBP49356 437 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 APOFQ13790 326 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ELOA3BQ3SY89 546 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TMEM52BQ4KMG9 183 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 KHDRBS2Q5VWX1 349 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ENPP7Q6UWV6 458 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TAF8Q7Z7C8 310 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 ELOA3Q8NG57 546 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 OR10H5Q8NGA6 315 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 CHPT1Q8WUD6 406 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLCO4A1Q96BD0 722 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SLC25A36Q96CQ1 311 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 SORBS1Q9BX66 1292 aaKnown RBP9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TRPV4Q9HBA0 871 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 TAS2R10Q9NYW0 307 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 MAU2Q9Y6X3 613 aa9.45□□□□□ -0.9
TRAF1-202ENST00000540010 FXYD1O00168 92 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 LATO43561 262 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 ARL6IP5O75915 188 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 RCBTB2O95199 551 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MTNR1AP48039 350 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 RGS6P49758 472 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 FGFBP1Q14512 234 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PON3Q15166 354 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 ZMYND11Q15326 602 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 GFOD2Q3B7J2 385 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MEDAGQ5VYS4 303 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 CEACAM19Q7Z692 300 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 DCUN1D3Q8IWE4 304 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 RFT1Q96AA3 541 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 HDAC8Q9BY41 377 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 B3GNT4Q9C0J1 378 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 FAM186AA6NE01 2351 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 CLDN4O14493 209 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 C1orf105O95561 183 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 C5AR1P21730 350 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 IMPA1P29218 277 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 NAA10P41227 235 aaPredicted RBP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 SCRN3Q0VDG4 424 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MAP4K2Q12851 820 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MICAQ29983 383 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 CEP68Q76N32 757 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF627Q7L945 461 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 NRARPQ7Z6K4 114 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 OR4N5Q8IXE1 308 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PARP16Q8N5Y8 322 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 DPCDQ9BVM2 203 aaPredicted RBP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 STUB1Q9UNE7 303 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 SEC16AO15027 2179 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 A8MUA0 341 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 J3KTA2 159 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 FAAHO00519 579 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PCDH17O14917 1159 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 CD2P06729 351 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 PEPDP12955 493 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 F8A1P23610 371 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 DNASE1P24855 282 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 HRH2P25021 359 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 TNFSF8P32971 234 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 CDKN2CP42773 168 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 DNASE1L1P49184 302 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 GBX1Q14549 363 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 SCGB2B2Q4G0G5 96 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 L3MBTL4Q8NA19 623 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 FBXO15Q8NCQ5 510 aaPredicted RBP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 OR52E4Q8NGH9 312 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 OR52N2Q8NGI0 321 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 OR51L1Q8NGJ5 315 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF480Q8WV37 535 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 OR5P2Q8WZ92 322 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 ELSPBP1Q96BH3 223 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 COMMD4Q9H0A8 199 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 EPHX3Q9H6B9 360 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MKKSQ9NPJ1 570 aaPredicted RBP9.44□□□□□ -0.9
TRAF1-202ENST00000540010 MED11Q9P086 117 aa9.44□□□□□ -0.9
TRAF1-202ENST00000540010 HOXB2P14652 356 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 EIF2DP41214 584 aaKnown RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 SNTB2Q13425 540 aaKnown RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 KEAP1Q14145 624 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 NNATQ16517 81 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 GGTA1PQ4G0N0 100 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 FRMPD2BQ6IN97 320 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 LNX2Q8N448 690 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 LINC00471Q8N535 108 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 OSTF1Q92882 214 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ADAD1Q96M93 576 aaKnown RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 TMEM45AQ9NWC5 275 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CNIH4Q9P003 139 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 HELZP42694 1942 aaKnown RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ASPDHA6ND91 283 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 A6NL46 340 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 SERPINA3P01011 423 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 MT-ND5P03915 603 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms