RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SOX18P35713 384 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 GRK6P43250 576 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 XCR1P46094 333 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 DSG2Q14126 1118 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 SERTAD2Q14140 314 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 SYPL1Q16563 259 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 IQCCQ4KMZ1 466 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 RPS26P11Q5JNZ5 115 aaPredicted RBP15.77■□□□□ 0.12
COPS3-212ENST00000539941 EXOSC6Q5RKV6 272 aaKnown RBP15.77■□□□□ 0.12
COPS3-212ENST00000539941 GPR141Q7Z602 305 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 SHISA5Q8N114 240 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 SPPL2AQ8TCT8 520 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 NRBF2Q96F24 287 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 DHRS1Q96LJ7 313 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 ZNF578Q96N58 590 aaPredicted RBP15.77■□□□□ 0.12
COPS3-212ENST00000539941 YIPF4Q9BSR8 244 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 EQTNQ9NQ60 294 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 PNPLA3Q9NST1 481 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 IFT80Q9P2H3 777 aaPredicted RBP15.77■□□□□ 0.12
COPS3-212ENST00000539941 TMEM184BQ9Y519 407 aaPredicted RBP15.77■□□□□ 0.12
COPS3-212ENST00000539941 DCHS1Q96JQ0 3298 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 IGHV5-10-1A0A0J9YXX1 117 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 A0A1B0GX78 115 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 hCG_2039718K7EN88 272 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 CD247P20963 164 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ALDH3A2P51648 485 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ARPC4P59998 168 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 FUT5Q11128 374 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 DAG1Q14118 895 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 MOGQ16653 247 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ZBED5Q49AG3 693 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 PLA2G2CQ5R387 149 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 HEPHL1Q6MZM0 1159 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 SHQ1Q6PI26 577 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 RBM18Q96H35 190 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 RDH12Q96NR8 316 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 NEURL2Q9BR09 285 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 RBCK1Q9BYM8 510 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 CXorf21Q9HAI6 301 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 USE1Q9NZ43 259 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 NDOR1Q9UHB4 597 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 SCN2AQ99250 2005 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ALAS2P22557 587 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 DNAJA1P31689 397 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 DCTP40126 519 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ARHGDIAP52565 204 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 SYT16Q17RD7 645 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 KCTD21Q4G0X4 260 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 TRMT12Q53H54 448 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 STK32CQ86UX6 486 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 GALNT12Q8IXK2 581 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 VWA5B2Q8N398 1253 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 METTL27Q8N6F8 245 aaPredicted RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 CDRT4Q8N9R6 151 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 PLEKHA8Q96JA3 519 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 GFM1Q96RP9 751 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 STACQ99469 402 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 RBM4BQ9BQ04 359 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 RBM4Q9BWF3 364 aaKnown RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 ALOXE3Q9BYJ1 711 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 PIGUQ9H490 435 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 RUBCNLQ9H714 662 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 ANKRA2Q9H9E1 313 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 SMPD3Q9NY59 655 aaPredicted RBP15.76■□□□□ 0.11
COPS3-212ENST00000539941 SEC14L3Q9UDX4 400 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 PCDHGB3Q9Y5G1 929 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 CLDN16Q9Y5I7 305 aa15.76■□□□□ 0.11
COPS3-212ENST00000539941 LAMA1P25391 3075 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 A0A087WXM4 84 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 TRIM64CA6NLI5 447 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 KPNA4O00629 521 aaPredicted RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 ADAMDEC1O15204 470 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 CASC3O15234 703 aaKnown RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 CHRM4P08173 479 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 FPR1P21462 350 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 FBLP22087 321 aaKnown RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 STT3AP46977 705 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 KCNJ5P48544 419 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 TRA2AQ13595 282 aaKnown RBP eCLIP15.75■□□□□ 0.11
COPS3-212ENST00000539941 COL9A2Q14055 689 aaPredicted RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 GK3PQ14409 553 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 GPAT3Q53EU6 434 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 NHSL2Q5HYW2 709 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 C16orf62Q7Z3J2 963 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 CHERPQ8IWX8 916 aaKnown RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 CENPSQ8N2Z9 138 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 ADAMTS16Q8TE57 1224 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 PROX1Q92786 737 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 HOXB13Q92826 284 aaPredicted RBP15.75■□□□□ 0.11
COPS3-212ENST00000539941 SLC35A4Q96G79 324 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 CCDC74BQ96LY2 380 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 DGAT2Q96PD7 388 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 EPYCQ99645 322 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 GABARAPL1Q9H0R8 117 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 REEP1Q9H902 201 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 ZNF304Q9HCX3 659 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 DUSP22Q9NRW4 184 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 LANCL2Q9NS86 450 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms