RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 AIFM2Q9BRQ8 373 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 TTYH2Q9BSA4 534 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 CNPPD1Q9BV87 410 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 CIPCQ9C0C6 399 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 C11orf54Q9H0W9 315 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 RANBP3Q9H6Z4 567 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 PPP1R3EQ9H7J1 279 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ANKRA2Q9H9E1 313 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 BRF2Q9HAW0 419 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 TRIM39Q9HCM9 518 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 RANGRFQ9HD47 186 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ITM2CQ9NQX7 267 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ACER3Q9NUN7 267 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ABCB8Q9NUT2 735 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 GIMAP4Q9NUV9 329 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 GPRC5BQ9NZH0 403 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ATP6V1HQ9UI12 483 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 KCND3Q9UK17 655 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 VPS4AQ9UN37 437 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 DIMT1Q9UNQ2 313 aaKnown RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 MGAT4BQ9UQ53 548 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 PRELID1Q9Y255 219 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 ENPP4Q9Y6X5 453 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 LOC400499M0QZD8 3231 aa7.23□□□□□ -1.25
CCDC60-204ENST00000539847 SMG1Q96Q15 3661 aaKnown RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 HELZP42694 1942 aaKnown RBP7.23□□□□□ -1.25
CCDC60-204ENST00000539847 LAMA5O15230 3695 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GOLGA4Q13439 2230 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 A0A1W2PQ72 361 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZSCAN5BA6NJL1 495 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 A6NL46 340 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 LEUTXA8MZ59 168 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FFAR3O14843 346 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MYL12BO14950 172 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 KPNA5O15131 536 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GPR42O15529 346 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 RGS5O15539 181 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 COCHO43405 550 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SH3BP5O60239 455 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ACSL4O60488 711 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TPST2O60704 377 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GCM2O75603 506 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SLC25A14O95258 325 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 CER1O95813 267 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 PIRTP0C851 137 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 OSMP13725 252 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MYL12AP19105 171 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 EPORP19235 508 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 IDH2P48735 452 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SLC11A2P49281 568 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 RAG2P55895 527 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 AP1S1P61966 158 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 RRAS2P62070 204 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 EFEMP1Q12805 493 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MRPL28Q13084 256 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SLAMF1Q13291 335 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ENPP2Q13822 863 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MED22Q15528 200 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 NDUFA9Q16795 377 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 C18orf21Q32NC0 220 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 KLHL22Q53GT1 634 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 C3orf38Q5JPI3 329 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 CPTPQ5TA50 214 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZDHHC20Q5W0Z9 365 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SAXO2Q658L1 398 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 C12orf73Q69YU5 71 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF770Q6IQ21 691 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 CD200R1LQ6Q8B3 271 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FAM131AQ6UXB0 335 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF730Q6ZMV8 503 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TMPRSS7Q7RTY8 843 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SERPINA9Q86WD7 417 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GRAMD2AQ8IUY3 354 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SFTPA1Q8IWL2 248 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FAM20CQ8IXL6 584 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 DMRTC2Q8IXT2 367 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 LAS2Q8IYD9 372 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 LRRC56Q8IYG6 542 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 CADM2Q8N3J6 435 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 NATD1Q8N6N6 113 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FRMD1Q8N878 549 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 DCBLD1Q8N8Z6 715 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 C19orf18Q8NEA5 215 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 OR52N2Q8NGI0 321 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 OR5H6Q8NGV6 325 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 WDR36Q8NI36 951 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 BAHD1Q8TBE0 780 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ENKURQ8TC29 256 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 ACOT12Q8WYK0 555 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 FBXO32Q969P5 355 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 CREB3L1Q96BA8 519 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MTERF3Q96E29 417 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 MRGPRX1Q96LB2 322 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 KCTD7Q96MP8 289 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 GPR137Q96N19 417 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 SLC6A18Q96N87 628 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TSSK3Q96PN8 268 aa7.22□□□□□ -1.25
CCDC60-204ENST00000539847 TEFMQ96QE5 360 aaKnown RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 UBL7Q96S82 380 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-204ENST00000539847 DCLRE1CQ96SD1 692 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms