RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HOXD1Q9GZZ0 328 aa16.04■□□□□ 0.16
PCDHB17P-201ENST00000539533 PILRBQ9UKJ0 227 aa16.04■□□□□ 0.16
PCDHB17P-201ENST00000539533 PI4KAP42356 2102 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 A6NL46 340 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 CPN2P22792 545 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 NTSP30990 170 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 GPC1P35052 558 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 PCGF2P35227 344 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 OR1D5P58170 312 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 RPP38P78345 283 aaKnown RBP16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZNF404Q494X3 552 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 APH1BQ8WW43 257 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 HSH2DQ96JZ2 352 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 C10orf90Q96M02 699 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZBTB20Q9HC78 741 aaPredicted RBP16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 SCN2AQ99250 2005 aa16.03■□□□□ 0.16
PCDHB17P-201ENST00000539533 IGHV5-51A0A0C4DH38 117 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 CASC3O15234 703 aaKnown RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 LIPAP38571 399 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 BUD31P41223 144 aaPredicted RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 ARRB1P49407 418 aaPredicted RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 TUBA1BP68363 451 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 TNFRSF17Q02223 184 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 NPRL3Q12980 569 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 TP53BP2Q13625 1128 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 SYT16Q17RD7 645 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 MANEAQ5SRI9 462 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 FAHD1Q6P587 224 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 TNFAIP8L2Q6P589 184 aaPredicted RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 CEACAM20Q6UY09 585 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 TUBA1AQ71U36 451 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 SZRD1Q7Z422 152 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 GATAD2AQ86YP4 633 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 DNAJC22Q8N4W6 341 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 HORMAD2Q8N7B1 307 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 NFKBIDQ8NI38 313 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 PIGKQ92643 395 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 MMP27Q9H306 513 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 REEP1Q9H902 201 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 THUMPD1Q9NXG2 353 aaKnown RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 ENTPD4Q9Y227 616 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 CSNK1G3Q9Y6M4 447 aa16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 ARID1BQ8NFD5 2236 aaPredicted RBP16.02■□□□□ 0.16
PCDHB17P-201ENST00000539533 UGT2B10P36537 528 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 SIM1P81133 766 aaPredicted RBP16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 EEF1A2Q05639 463 aaKnown RBP16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 SCARB2Q14108 478 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 COLEC12Q5KU26 742 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 CBLL1Q75N03 491 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 OR4N5Q8IXE1 308 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 ENTHD1Q8IYW4 607 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 TCTN2Q96GX1 697 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZNF486Q96H40 463 aaPredicted RBP16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 TXNDC15Q96J42 360 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZNF681Q96N22 645 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 TMEM38AQ9H6F2 299 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 PHF11Q9UIL8 331 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 WDR87Q6ZQQ6 2873 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 NCOR1O75376 2440 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 ASXL3Q9C0F0 2248 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 SPTBP11277 2137 aa16.02■□□□□ 0.15
PCDHB17P-201ENST00000539533 METTL15A6NJ78 407 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 TAF4O00268 1085 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 AIREO43918 545 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 GALR3O60755 368 aaPredicted RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 CSNK2A2P19784 350 aaPredicted RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZNF10P21506 573 aaPredicted RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ITGA1P56199 1179 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 CAMK2BQ13554 666 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZNF181Q2M3W8 571 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 TUBA3EQ6PEY2 450 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 TMEM105Q8N8V8 129 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 FCGR1BQ92637 280 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 TP63Q9H3D4 680 aaPredicted RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 SLC22A7Q9Y694 548 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZNF780BQ9Y6R6 833 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 AGAP5A6NIR3 686 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 E9PQ18 207 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 SGK494L7N484 410 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 SNPHO15079 494 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 NUDT21O43809 227 aaKnown RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 DSTNP60981 165 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 CSNK2BP67870 215 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 CDK6Q00534 326 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 GPR19Q15760 415 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 AMZ1Q400G9 498 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 STEAP3Q658P3 488 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ARHGEF39Q8N4T4 335 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 RAB8BQ92930 207 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 COPS4Q9BT78 406 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 SERHL2Q9H4I8 314 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ANKRA2Q9H9E1 313 aa16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 MOV10Q9HCE1 1003 aaKnown RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 ZCCHC3Q9NUD5 404 aaKnown RBP16.01■□□□□ 0.15
PCDHB17P-201ENST00000539533 TNRC6BQ9UPQ9 1833 aaKnown RBP16■□□□□ 0.15
PCDHB17P-201ENST00000539533 IGHV1OR21-1A0A087WYE8 117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms