RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 HEBP1Q9NRV9 189 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 MGAT4AQ9UM21 535 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 M0R233 179 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 ARHGEF15O94989 841 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 GTF2F2P13984 249 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 PROX2Q3B8N5 592 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 RPL13AP3Q6NVV1 102 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 RNF175Q8N4F7 328 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 ZBTB20Q9HC78 741 aaPredicted RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 HCFC1R1Q9NWW0 138 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 GSKIPQ9P0R6 139 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 SCP2D1Q9UJQ7 156 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 ABCG2Q9UNQ0 655 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 SLC22A31A6NKX4 558 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 RGS9O75916 674 aaPredicted RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 THEGLP0DJG4 465 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 S1PR1P21453 382 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 GABRB3P28472 473 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 GRK5P34947 590 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 VAMP2P63027 116 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 GRK1Q15835 563 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 EGLN2Q96KS0 407 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 SCGB3A2Q96PL1 93 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 R3HDMLQ9H3Y0 253 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 ARNT2Q9HBZ2 717 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 THSD1Q9NS62 852 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 DISC1C4P0D8 188 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 FNTBP49356 437 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 SHC2P98077 582 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 SPIN3Q5JUX0 258 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 RSPO2Q6UXX9 243 aaPredicted RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 TTLL10Q6ZVT0 673 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 OR52E2Q8NGJ4 325 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 TGM7Q96PF1 710 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
CACNB1-206ENST00000539338 INTS6Q9UL03 887 aaKnown RBP13.78□□□□□ -0.2
CACNB1-206ENST00000539338 ADORA3P0DMS8 318 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 MEX3DQ86XN8 651 aaKnown RBP13.77□□□□□ -0.2
CACNB1-206ENST00000539338 SPARTQ8N0X7 666 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 OR4K13Q8NH42 304 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 SGTBQ96EQ0 304 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 OBP2AQ9NY56 170 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 CNIH4Q9P003 139 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 FBXO9Q9UK97 447 aaPredicted RBP13.77□□□□□ -0.2
CACNB1-206ENST00000539338 PCDHGB2Q9Y5G2 931 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 PCDHGA8Q9Y5G5 932 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 NARSO43776 548 aaKnown RBP13.77□□□□□ -0.2
CACNB1-206ENST00000539338 CCR7P32248 378 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 PTGER1P34995 402 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 APOFQ13790 326 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 GRIN2CQ14957 1233 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 TRAM1Q15629 374 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 GLT8D1Q68CQ7 371 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 DUS1LQ6P1R4 473 aaKnown RBP13.77□□□□□ -0.2
CACNB1-206ENST00000539338 MFSD6LQ8IWD5 586 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 DENND6BQ8NEG7 585 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 CCDC54Q8NEL0 328 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 SPPL3Q8TCT6 385 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.2
CACNB1-206ENST00000539338 ATG5Q9H1Y0 275 aa13.77□□□□□ -0.2
CACNB1-206ENST00000539338 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 SOX30O94993 753 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 ATXN1LP0C7T5 689 aaKnown RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 CCNOP22674 350 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 LHCGRP22888 699 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 ADRA1AP35348 466 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 LSM14AQ8ND56 463 aaKnown RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 PROKR1Q8TCW9 393 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 A0A1B0GVG6 124 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 GXYLT2A0PJZ3 443 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 FRS3O43559 492 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 RBBP9O75884 186 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 HEXBP07686 556 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 PRKCAP17252 672 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 CBFBQ13951 182 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 SELPLGQ14242 412 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF761Q86XN6 746 aaPredicted RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 OR2L2Q8NH16 312 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 OR5J2Q8NH18 312 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 ACOT12Q8WYK0 555 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 MROQ9BYG7 248 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 CEPT1Q9Y6K0 416 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 A0A0G2JPF8 293 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 HNRNPCL3B7ZW38 293 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 MEN1O00255 615 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 HNRNPCL4P0DMR1 293 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 CPOXP36551 454 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 GPR143P51810 404 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 FOXK1P85037 733 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 PTPRRQ15256 657 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 CPZQ66K79 652 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms