RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RSL1D1O76021 490 aaKnown RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 CT45A8P0DMV1 189 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 CT45A9P0DMV2 189 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 CEACAM8P31997 349 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 MPIP34949 423 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 KRT20P35900 424 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 DLX5P56178 289 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 WNT3P56703 355 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 CORO7P57737 925 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 ZNF155Q12901 538 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 EFR3AQ14156 821 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 CT45A2Q5DJT8 189 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 TMEM200AQ86VY9 491 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 TNIP2Q8NFZ5 429 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 OR7G2Q8NG99 324 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 EPS8L3Q8TE67 593 aaKnown RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 ABTB1Q969K4 478 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 WDYHV1Q96HA8 205 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 OR2B2Q9GZK3 357 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 MYNNQ9NPC7 610 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 MIEF1Q9NQG6 463 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 POLR3HQ9Y535 204 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-206ENST00000539320 AKAP6Q13023 2319 aa20.24■□□□□ 0.83
SCARB1-206ENST00000539320 C2orf72A6NCS6 295 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 COPEO14579 308 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 COQ9O75208 318 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 NME6O75414 186 aaPredicted RBP20.23■□□□□ 0.83
SCARB1-206ENST00000539320 IL12BP29460 328 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 TIMP3P35625 211 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 C2orf80Q0P641 193 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 CES4AQ5XG92 561 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 NSUN5P2Q63ZY6 315 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 FAM71E1Q6IPT2 247 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 TRIM46Q7Z4K8 759 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 FAM76AQ8TAV0 307 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 ADOQ96SZ5 270 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 TNFRSF12AQ9NP84 129 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 RRAGDQ9NQL2 400 aaPredicted RBP20.23■□□□□ 0.83
SCARB1-206ENST00000539320 OXSMQ9NWU1 459 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 MID2Q9UJV3 735 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 EXO1Q9UQ84 846 aaKnown RBP20.23■□□□□ 0.83
SCARB1-206ENST00000539320 WIF1Q9Y5W5 379 aa20.23■□□□□ 0.83
SCARB1-206ENST00000539320 CD8B2A6NJW9 211 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 MYO1GB0I1T2 1018 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 TSPAN2O60636 221 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 ACTL6AO96019 429 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 IL2RAP01589 272 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 CPA3P15088 417 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 BMP5P22003 454 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 NTSP30990 170 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 ASCL1P50553 236 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 NCBP2P52298 156 aaKnown RBP eCLIP20.22■□□□□ 0.831e-7■□□□□ 9.7
SCARB1-206ENST00000539320 ARSKQ6UWY0 536 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 LARP4Q71RC2 724 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCARB1-206ENST00000539320 PLCZ1Q86YW0 608 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 SLC44A2Q8IWA5 706 aaPredicted RBP20.22■□□□□ 0.83
SCARB1-206ENST00000539320 WDSUB1Q8N9V3 476 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 DTNBP1Q96EV8 351 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 TRIB1Q96RU8 372 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 C12orf65Q9H3J6 166 aaKnown RBP20.22■□□□□ 0.83
SCARB1-206ENST00000539320 TAS2R9Q9NYW1 312 aa20.22■□□□□ 0.83
SCARB1-206ENST00000539320 WBP11Q9Y2W2 641 aaKnown RBP20.22■□□□□ 0.83
SCARB1-206ENST00000539320 DOCK7Q96N67 2140 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 A0A087WV62 115 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 CBR3O75828 277 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 SLITRK5O94991 958 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 ZWINTO95229 277 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 JUNP05412 331 aaKnown RBP20.21■□□□□ 0.83
SCARB1-206ENST00000539320 UROSP10746 265 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 MC3RP41968 323 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 RCAN2Q14206 197 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 PRSS53Q2L4Q9 553 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 LIPMQ5VYY2 423 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 IKBIPQ70UQ0 350 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 C4orf33Q8N1A6 199 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 OR14L1PQ8NHC6 308 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCARB1-206ENST00000539320 LRRC46Q96FV0 321 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 L2HGDHQ9H9P8 463 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 OR10H1Q9Y4A9 318 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 KIAA1549Q9HCM3 1950 aa20.21■□□□□ 0.83
SCARB1-206ENST00000539320 MBD3L4A6NDZ8 208 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 MBD3L3A6NE82 208 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 MBD3L5A6NJ08 208 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 KRT4P19013 534 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 POU3F2P20265 443 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 SRD5A2P31213 254 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 UQCRC1P31930 480 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 PEX19P40855 299 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 ZNF136P52737 540 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 MRPS22P82650 360 aaKnown RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 ENPP6Q6UWR7 440 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 TMEM107Q6UX40 140 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 MBD3L2Q8NHZ7 208 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 RNF138Q8WVD3 245 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.2■□□□□ 0.821e-10■■■■■ 65.8
SCARB1-206ENST00000539320 EFHD2Q96C19 240 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 SH3GL2Q99962 352 aa20.2■□□□□ 0.82
SCARB1-206ENST00000539320 DDX18Q9NVP1 670 aaKnown RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 TAS2R7Q9NYW3 318 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms