RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 GPR174Q9BXC1 333 aa2.76□□□□□ -1.97
CCDC7-209ENST00000539197 ZCCHC3Q9NUD5 404 aaKnown RBP2.76□□□□□ -1.97
CCDC7-209ENST00000539197 CNIH4Q9P003 139 aa2.76□□□□□ -1.97
CCDC7-209ENST00000539197 EMCNQ9ULC0 261 aa2.76□□□□□ -1.97
CCDC7-209ENST00000539197 STX8Q9UNK0 236 aa2.76□□□□□ -1.97
CCDC7-209ENST00000539197 KIF7Q2M1P5 1343 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 ARHGAP21Q5T5U3 1957 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 A0A1B0GUA9 196 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 EI24O14681 340 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 SH2D1BO14796 132 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 LCMT2O60294 686 aaKnown RBP2.75□□□□□ -1.97
CCDC7-209ENST00000539197 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-209ENST00000539197 GSTA1P08263 222 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 SERPINF2P08697 491 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 GHRP10912 638 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 IGFBP5P24593 272 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 UGT1A3P35503 534 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 TNNT3P45378 269 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-209ENST00000539197 UCP2P55851 309 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 HERV-K104P63124 156 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 PSMA8Q8TAA3 256 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 DPH7Q9BTV6 452 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 MAD2L2Q9UI95 211 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 FBXW2Q9UKT8 454 aa2.75□□□□□ -1.97
CCDC7-209ENST00000539197 FOXA2Q9Y261 457 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-209ENST00000539197 A0A0A6YYD4 124 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 NPIPA5A0A0B4J1W7 369 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 NPIPA5E9PKD4 350 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 WWP2O00308 870 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 CHEK1O14757 476 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 PDE5AO76074 875 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 CENPBP07199 599 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 ALDH3B2P48448 385 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 SMSP52788 366 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 RPS4XP62701 263 aaKnown RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 EIF4EBP1Q13541 118 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 HKDC1Q2TB90 917 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 GPAT3Q53EU6 434 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 GLRA4Q5JXX5 417 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 CWC27Q6UX04 472 aaKnown RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 B3GLCTQ6Y288 498 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 PIWIL3Q7Z3Z3 882 aaKnown RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 PRSS42Q7Z5A4 293 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 PYROXD2Q8N2H3 581 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 NAT8LQ8N9F0 302 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 OR4A16Q8NH70 328 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 DHTKD1Q96HY7 919 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 EPSTI1Q96J88 318 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 FAM213AQ9BRX8 229 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 SLC5A7Q9GZV3 580 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 TSPYL1Q9H0U9 437 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 MMADHCQ9H3L0 296 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-209ENST00000539197 IL1RAPL2Q9NP60 686 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 NARFQ9UHQ1 456 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 SNX5Q9Y5X3 404 aa2.74□□□□□ -1.97
CCDC7-209ENST00000539197 LRRD1A4D1F6 860 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 REC8O95072 547 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 H2AFZP0C0S5 128 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 IGHV1-2P23083 117 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 ATP5DP30049 168 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 HTR1FP30939 366 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 VCPP55072 806 aaKnown RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 ROR1Q01973 937 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 BNIP1Q12981 228 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 SLMAPQ14BN4 828 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 EXOSC7Q15024 291 aaKnown RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 SMU1Q2TAY7 513 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 ARMC3Q5W041 872 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 HIST2H2AA3Q6FI13 130 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 LPCAT1Q8NF37 534 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 BBS1Q8NFJ9 593 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 RFESDQ8TAC1 157 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 FBXO30Q8TB52 745 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 MRPL53Q96EL3 112 aaKnown RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 CPXM1Q96SM3 734 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 FUT8Q9BYC5 575 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 ABCG4Q9H172 646 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 OPN3Q9H1Y3 402 aaPredicted RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 Q9H3A6 140 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 NRN1Q9NPD7 142 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 CENPMQ9NSP4 180 aa2.73□□□□□ -1.97
CCDC7-209ENST00000539197 AKAP7Q9P0M2 348 aaPredicted RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 PRG3Q9Y2Y8 225 aaPredicted RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 MRPS2Q9Y399 296 aaKnown RBP2.73□□□□□ -1.97
CCDC7-209ENST00000539197 A0A0J9YVX5 310 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 A0A1W2PRQ8 180 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 SMIM30A4D0T7 59 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 C11orf98E9PRG8 122 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 SLC28A1O00337 649 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 TYROBPO43914 113 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 MMP23AO75900 390 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 TOXO94900 526 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 TGDSO95455 350 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 HIST1H2AGP0C0S8 130 aaPredicted RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 SAA4P35542 130 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 NSFP46459 744 aaKnown RBP2.72□□□□□ -1.97
CCDC7-209ENST00000539197 METAP1P53582 386 aa2.72□□□□□ -1.97
CCDC7-209ENST00000539197 NME5P56597 212 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms